Protein–RNA interactions for Protein: Q96A99

PTX4, Pentraxin-4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4Q96A99 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTX4Q96A99 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTX4Q96A99 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.16■□□□□ 0.82
PTX4Q96A99 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.15■□□□□ 0.82
PTX4Q96A99 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTX4Q96A99 AC004812.2-201ENST00000611079 2094 ntBASIC20.15■□□□□ 0.82
PTX4Q96A99 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTX4Q96A99 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTX4Q96A99 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.15■□□□□ 0.82
PTX4Q96A99 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.15■□□□□ 0.82
PTX4Q96A99 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.15■□□□□ 0.82
PTX4Q96A99 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.15■□□□□ 0.82
PTX4Q96A99 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
PTX4Q96A99 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTX4Q96A99 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTX4Q96A99 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
PTX4Q96A99 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTX4Q96A99 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.14■□□□□ 0.81
PTX4Q96A99 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTX4Q96A99 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PTX4Q96A99 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
PTX4Q96A99 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTX4Q96A99 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTX4Q96A99 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PTX4Q96A99 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTX4Q96A99 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTX4Q96A99 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PTX4Q96A99 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.13■□□□□ 0.81
PTX4Q96A99 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PTX4Q96A99 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTX4Q96A99 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PTX4Q96A99 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.12■□□□□ 0.81
PTX4Q96A99 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTX4Q96A99 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.11■□□□□ 0.81
PTX4Q96A99 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.11■□□□□ 0.81
PTX4Q96A99 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.11■□□□□ 0.81
PTX4Q96A99 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.11■□□□□ 0.81
PTX4Q96A99 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.1■□□□□ 0.81
PTX4Q96A99 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTX4Q96A99 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTX4Q96A99 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTX4Q96A99 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.1■□□□□ 0.81
PTX4Q96A99 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTX4Q96A99 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.1■□□□□ 0.81
PTX4Q96A99 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTX4Q96A99 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTX4Q96A99 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTX4Q96A99 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTX4Q96A99 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.09■□□□□ 0.81
PTX4Q96A99 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTX4Q96A99 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.09■□□□□ 0.81
PTX4Q96A99 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTX4Q96A99 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTX4Q96A99 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PTX4Q96A99 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTX4Q96A99 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTX4Q96A99 AC079834.2-201ENST00000609776 1949 ntBASIC20.08■□□□□ 0.81
PTX4Q96A99 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.08■□□□□ 0.81
PTX4Q96A99 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PTX4Q96A99 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.08■□□□□ 0.81
PTX4Q96A99 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.08■□□□□ 0.81
PTX4Q96A99 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PTX4Q96A99 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTX4Q96A99 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTX4Q96A99 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTX4Q96A99 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTX4Q96A99 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTX4Q96A99 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTX4Q96A99 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.07■□□□□ 0.8
PTX4Q96A99 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.07■□□□□ 0.8
PTX4Q96A99 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTX4Q96A99 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTX4Q96A99 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTX4Q96A99 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.06■□□□□ 0.8
PTX4Q96A99 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTX4Q96A99 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTX4Q96A99 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTX4Q96A99 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTX4Q96A99 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PTX4Q96A99 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PTX4Q96A99 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PTX4Q96A99 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PTX4Q96A99 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTX4Q96A99 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTX4Q96A99 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.05■□□□□ 0.8
PTX4Q96A99 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTX4Q96A99 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PTX4Q96A99 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTX4Q96A99 ABHD17AP4-201ENST00000411545 909 ntBASIC20.04■□□□□ 0.8
PTX4Q96A99 CR559946.2-201ENST00000623684 991 ntBASIC20.04■□□□□ 0.8
PTX4Q96A99 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTX4Q96A99 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PTX4Q96A99 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTX4Q96A99 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms