Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 KRT18P10-201ENST00000388836 1287 ntBASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LINC01561Q8N1V8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC15.78■□□□□ 0.12
LINC01561Q8N1V8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01561Q8N1V8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.77■□□□□ 0.11
LINC01561Q8N1V8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LINC01561Q8N1V8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01561Q8N1V8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.77■□□□□ 0.11
LINC01561Q8N1V8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01561Q8N1V8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 AL157400.5-201ENST00000507624 621 ntBASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01561Q8N1V8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 MIR3648-2-201ENST00000581792 180 ntBASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 MIR3648-1-201ENST00000615959 180 ntBASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC01561Q8N1V8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 SMPD5-203ENST00000639008 1464 ntBASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.74■□□□□ 0.11
LINC01561Q8N1V8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 AC133561.1-201ENST00000568600 2415 ntBASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.73■□□□□ 0.11
LINC01561Q8N1V8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 DUSP8P5-201ENST00000422884 1815 ntBASIC15.72■□□□□ 0.11
LINC01561Q8N1V8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms