Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC35.76■■■■□ 3.32
ABCA6Q8N139 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
ABCA6Q8N139 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
ABCA6Q8N139 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC35.75■■■■□ 3.31
ABCA6Q8N139 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC35.75■■■■□ 3.31
ABCA6Q8N139 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
ABCA6Q8N139 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
ABCA6Q8N139 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC35.75■■■■□ 3.31
ABCA6Q8N139 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC35.75■■■■□ 3.31
ABCA6Q8N139 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
ABCA6Q8N139 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC35.74■■■■□ 3.31
ABCA6Q8N139 CLTA-206ENST00000466396 695 ntTSL 2 BASIC35.74■■■■□ 3.31
ABCA6Q8N139 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC35.73■■■■□ 3.31
ABCA6Q8N139 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
ABCA6Q8N139 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC35.73■■■■□ 3.31
ABCA6Q8N139 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
ABCA6Q8N139 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC35.72■■■■□ 3.31
ABCA6Q8N139 PBX2P1-201ENST00000493219 1291 ntBASIC35.72■■■■□ 3.31
ABCA6Q8N139 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC35.72■■■■□ 3.31
ABCA6Q8N139 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
ABCA6Q8N139 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC35.71■■■■□ 3.31
ABCA6Q8N139 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
ABCA6Q8N139 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC35.71■■■■□ 3.31
ABCA6Q8N139 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
ABCA6Q8N139 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC35.7■■■■□ 3.31
ABCA6Q8N139 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
ABCA6Q8N139 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC35.69■■■■□ 3.3
ABCA6Q8N139 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC35.69■■■■□ 3.3
ABCA6Q8N139 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC35.68■■■■□ 3.3
ABCA6Q8N139 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC35.68■■■■□ 3.3
ABCA6Q8N139 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC35.67■■■■□ 3.3
ABCA6Q8N139 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
ABCA6Q8N139 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC35.67■■■■□ 3.3
ABCA6Q8N139 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC35.66■■■■□ 3.3
ABCA6Q8N139 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
ABCA6Q8N139 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC35.66■■■■□ 3.3
ABCA6Q8N139 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
ABCA6Q8N139 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC35.65■■■■□ 3.3
ABCA6Q8N139 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC35.65■■■■□ 3.3
ABCA6Q8N139 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC35.65■■■■□ 3.3
ABCA6Q8N139 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC35.65■■■■□ 3.3
ABCA6Q8N139 AL136162.1-201ENST00000607711 1078 ntBASIC35.65■■■■□ 3.3
ABCA6Q8N139 MIR5787-201ENST00000611784 55 ntBASIC35.65■■■■□ 3.3
ABCA6Q8N139 SNAI3-AS1-204ENST00000567997 2048 ntBASIC35.64■■■■□ 3.3
ABCA6Q8N139 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
ABCA6Q8N139 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC35.63■■■■□ 3.29
ABCA6Q8N139 UNC93B3-201ENST00000308076 687 ntBASIC35.63■■■■□ 3.29
ABCA6Q8N139 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC35.63■■■■□ 3.29
ABCA6Q8N139 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
ABCA6Q8N139 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC35.62■■■■□ 3.29
ABCA6Q8N139 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC35.62■■■■□ 3.29
ABCA6Q8N139 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
ABCA6Q8N139 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC35.61■■■■□ 3.29
ABCA6Q8N139 AC105265.2-201ENST00000467189 838 ntBASIC35.61■■■■□ 3.29
ABCA6Q8N139 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
ABCA6Q8N139 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
ABCA6Q8N139 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
ABCA6Q8N139 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC35.59■■■■□ 3.29
ABCA6Q8N139 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC35.58■■■■□ 3.29
ABCA6Q8N139 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC35.58■■■■□ 3.29
ABCA6Q8N139 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC35.58■■■■□ 3.29
ABCA6Q8N139 AC024257.2-201ENST00000549699 147 ntBASIC35.58■■■■□ 3.29
ABCA6Q8N139 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC35.57■■■■□ 3.29
ABCA6Q8N139 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
ABCA6Q8N139 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC35.56■■■■□ 3.28
ABCA6Q8N139 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
ABCA6Q8N139 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC35.56■■■■□ 3.28
ABCA6Q8N139 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
ABCA6Q8N139 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
ABCA6Q8N139 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC35.56■■■■□ 3.28
ABCA6Q8N139 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC35.56■■■■□ 3.28
ABCA6Q8N139 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC35.55■■■■□ 3.28
ABCA6Q8N139 EDA-201ENST00000338901 1233 ntBASIC35.55■■■■□ 3.28
ABCA6Q8N139 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC35.55■■■■□ 3.28
ABCA6Q8N139 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
ABCA6Q8N139 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
ABCA6Q8N139 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC35.54■■■■□ 3.28
ABCA6Q8N139 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC35.54■■■■□ 3.28
ABCA6Q8N139 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
ABCA6Q8N139 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
ABCA6Q8N139 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
ABCA6Q8N139 AP001330.3-201ENST00000520123 633 ntBASIC35.54■■■■□ 3.28
ABCA6Q8N139 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC35.53■■■■□ 3.28
ABCA6Q8N139 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC35.53■■■■□ 3.28
ABCA6Q8N139 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
ABCA6Q8N139 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
ABCA6Q8N139 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
ABCA6Q8N139 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
ABCA6Q8N139 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC35.53■■■■□ 3.28
ABCA6Q8N139 SSSCA1-AS1-201ENST00000567594 614 ntBASIC35.53■■■■□ 3.28
ABCA6Q8N139 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
ABCA6Q8N139 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC35.52■■■■□ 3.28
ABCA6Q8N139 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC35.51■■■■□ 3.28
ABCA6Q8N139 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC35.51■■■■□ 3.28
ABCA6Q8N139 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
ABCA6Q8N139 ANKRD20A6P-201ENST00000618763 204 ntBASIC35.51■■■■□ 3.28
ABCA6Q8N139 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC35.51■■■■□ 3.28
ABCA6Q8N139 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
ABCA6Q8N139 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC35.5■■■■□ 3.27
ABCA6Q8N139 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms