Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.69■■□□□ 1.22
COL27A1Q8IZC6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL27A1Q8IZC6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL27A1Q8IZC6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
COL27A1Q8IZC6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL27A1Q8IZC6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL27A1Q8IZC6 SNX5-217ENST00000606557 1087 ntBASIC22.68■■□□□ 1.22
COL27A1Q8IZC6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL27A1Q8IZC6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL27A1Q8IZC6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
COL27A1Q8IZC6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.68■■□□□ 1.22
COL27A1Q8IZC6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.68■■□□□ 1.22
COL27A1Q8IZC6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL27A1Q8IZC6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL27A1Q8IZC6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
COL27A1Q8IZC6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.67■■□□□ 1.22
COL27A1Q8IZC6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.67■■□□□ 1.22
COL27A1Q8IZC6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.67■■□□□ 1.22
COL27A1Q8IZC6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.67■■□□□ 1.22
COL27A1Q8IZC6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL27A1Q8IZC6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL27A1Q8IZC6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
COL27A1Q8IZC6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL27A1Q8IZC6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL27A1Q8IZC6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL27A1Q8IZC6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.66■■□□□ 1.22
COL27A1Q8IZC6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL27A1Q8IZC6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
COL27A1Q8IZC6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL27A1Q8IZC6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.66■■□□□ 1.22
COL27A1Q8IZC6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.65■■□□□ 1.22
COL27A1Q8IZC6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL27A1Q8IZC6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.65■■□□□ 1.22
COL27A1Q8IZC6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL27A1Q8IZC6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.65■■□□□ 1.22
COL27A1Q8IZC6 AC096631.2-201ENST00000436136 790 ntBASIC22.65■■□□□ 1.22
COL27A1Q8IZC6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL27A1Q8IZC6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL27A1Q8IZC6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.64■■□□□ 1.22
COL27A1Q8IZC6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
COL27A1Q8IZC6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.64■■□□□ 1.21
COL27A1Q8IZC6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL27A1Q8IZC6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL27A1Q8IZC6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL27A1Q8IZC6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL27A1Q8IZC6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
COL27A1Q8IZC6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL27A1Q8IZC6 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.63■■□□□ 1.21
COL27A1Q8IZC6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL27A1Q8IZC6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COL27A1Q8IZC6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL27A1Q8IZC6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL27A1Q8IZC6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.62■■□□□ 1.21
COL27A1Q8IZC6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL27A1Q8IZC6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.62■■□□□ 1.21
COL27A1Q8IZC6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.62■■□□□ 1.21
COL27A1Q8IZC6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.62■■□□□ 1.21
COL27A1Q8IZC6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL27A1Q8IZC6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL27A1Q8IZC6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL27A1Q8IZC6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.61■■□□□ 1.21
COL27A1Q8IZC6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.61■■□□□ 1.21
COL27A1Q8IZC6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.61■■□□□ 1.21
COL27A1Q8IZC6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL27A1Q8IZC6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL27A1Q8IZC6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
COL27A1Q8IZC6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL27A1Q8IZC6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
COL27A1Q8IZC6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
COL27A1Q8IZC6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL27A1Q8IZC6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL27A1Q8IZC6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL27A1Q8IZC6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL27A1Q8IZC6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
COL27A1Q8IZC6 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.58■■□□□ 1.21
COL27A1Q8IZC6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.58■■□□□ 1.21
COL27A1Q8IZC6 AL356740.2-201ENST00000601559 647 ntBASIC22.58■■□□□ 1.21
COL27A1Q8IZC6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
COL27A1Q8IZC6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
COL27A1Q8IZC6 AC142086.6-201ENST00000621154 1765 ntBASIC22.58■■□□□ 1.2
COL27A1Q8IZC6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
COL27A1Q8IZC6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.58■■□□□ 1.2
COL27A1Q8IZC6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL27A1Q8IZC6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL27A1Q8IZC6 SUDS3P1-201ENST00000505831 966 ntBASIC22.57■■□□□ 1.2
COL27A1Q8IZC6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL27A1Q8IZC6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL27A1Q8IZC6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL27A1Q8IZC6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL27A1Q8IZC6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL27A1Q8IZC6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
COL27A1Q8IZC6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL27A1Q8IZC6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.56■■□□□ 1.2
COL27A1Q8IZC6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.56■■□□□ 1.2
COL27A1Q8IZC6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.56■■□□□ 1.2
COL27A1Q8IZC6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL27A1Q8IZC6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL27A1Q8IZC6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms