Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDPF1Q6NVV7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CDPF1Q6NVV7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDPF1Q6NVV7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDPF1Q6NVV7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDPF1Q6NVV7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.85■□□□□ 0.45
CDPF1Q6NVV7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDPF1Q6NVV7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDPF1Q6NVV7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 AC096887.2-201ENST00000623443 1957 ntBASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 AC137767.1-201ENST00000602918 1920 ntBASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 AC100797.4-201ENST00000631653 1827 ntBASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 MIR7108-201ENST00000614319 87 ntBASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.84■□□□□ 0.45
CDPF1Q6NVV7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CDPF1Q6NVV7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDPF1Q6NVV7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CDPF1Q6NVV7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDPF1Q6NVV7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.83■□□□□ 0.45
CDPF1Q6NVV7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
CDPF1Q6NVV7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.83■□□□□ 0.45
CDPF1Q6NVV7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDPF1Q6NVV7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDPF1Q6NVV7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDPF1Q6NVV7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDPF1Q6NVV7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.83■□□□□ 0.44
CDPF1Q6NVV7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDPF1Q6NVV7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDPF1Q6NVV7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDPF1Q6NVV7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDPF1Q6NVV7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDPF1Q6NVV7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDPF1Q6NVV7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDPF1Q6NVV7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDPF1Q6NVV7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.82■□□□□ 0.44
CDPF1Q6NVV7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.82■□□□□ 0.44
CDPF1Q6NVV7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 WHAMMP3-201ENST00000611636 1609 ntBASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDPF1Q6NVV7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 WASH5P-204ENST00000632292 975 ntBASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 AP004833.2-201ENST00000532228 1454 ntBASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDPF1Q6NVV7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.79■□□□□ 0.44
CDPF1Q6NVV7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDPF1Q6NVV7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.78■□□□□ 0.44
CDPF1Q6NVV7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDPF1Q6NVV7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDPF1Q6NVV7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDPF1Q6NVV7 AF106564.1-201ENST00000607058 2553 ntBASIC17.78■□□□□ 0.44
CDPF1Q6NVV7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDPF1Q6NVV7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.78■□□□□ 0.44
CDPF1Q6NVV7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDPF1Q6NVV7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDPF1Q6NVV7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDPF1Q6NVV7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDPF1Q6NVV7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDPF1Q6NVV7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDPF1Q6NVV7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CDPF1Q6NVV7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.77■□□□□ 0.44
CDPF1Q6NVV7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDPF1Q6NVV7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms