Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TPM3P06753 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TPM3P06753 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TPM3P06753 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TPM3P06753 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.31■■□□□ 1.8
TPM3P06753 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.31■■□□□ 1.8
TPM3P06753 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.3■■□□□ 1.8
TPM3P06753 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TPM3P06753 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TPM3P06753 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.3■■□□□ 1.8
TPM3P06753 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.3■■□□□ 1.8
TPM3P06753 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.3■■□□□ 1.8
TPM3P06753 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TPM3P06753 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TPM3P06753 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TPM3P06753 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TPM3P06753 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TPM3P06753 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
TPM3P06753 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
TPM3P06753 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TPM3P06753 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TPM3P06753 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TPM3P06753 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.29■■□□□ 1.8
TPM3P06753 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TPM3P06753 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TPM3P06753 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TPM3P06753 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TPM3P06753 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TPM3P06753 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.28■■□□□ 1.8
TPM3P06753 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TPM3P06753 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TPM3P06753 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TPM3P06753 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TPM3P06753 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
TPM3P06753 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TPM3P06753 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TPM3P06753 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TPM3P06753 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TPM3P06753 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TPM3P06753 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
TPM3P06753 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.26■■□□□ 1.79
TPM3P06753 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TPM3P06753 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TPM3P06753 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.26■■□□□ 1.79
TPM3P06753 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TPM3P06753 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TPM3P06753 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TPM3P06753 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TPM3P06753 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TPM3P06753 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TPM3P06753 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.25■■□□□ 1.79
TPM3P06753 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.25■■□□□ 1.79
TPM3P06753 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
TPM3P06753 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TPM3P06753 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
TPM3P06753 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TPM3P06753 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TPM3P06753 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TPM3P06753 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.24■■□□□ 1.79
TPM3P06753 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.24■■□□□ 1.79
TPM3P06753 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.24■■□□□ 1.79
TPM3P06753 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TPM3P06753 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TPM3P06753 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TPM3P06753 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TPM3P06753 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.23■■□□□ 1.79
TPM3P06753 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TPM3P06753 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
TPM3P06753 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.23■■□□□ 1.79
TPM3P06753 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TPM3P06753 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
TPM3P06753 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TPM3P06753 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC26.22■■□□□ 1.79
TPM3P06753 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TPM3P06753 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TPM3P06753 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TPM3P06753 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
TPM3P06753 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TPM3P06753 AC126177.7-201ENST00000547904 679 ntBASIC26.21■■□□□ 1.79
TPM3P06753 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TPM3P06753 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.2■■□□□ 1.78
TPM3P06753 SLC6A10P-202ENST00000431994 2058 ntBASIC26.2■■□□□ 1.78
TPM3P06753 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
TPM3P06753 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.2■■□□□ 1.78
TPM3P06753 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.2■■□□□ 1.78
TPM3P06753 DUX4L11-201ENST00000611504 1267 ntBASIC26.2■■□□□ 1.78
TPM3P06753 DUX4L12-201ENST00000614593 1267 ntBASIC26.2■■□□□ 1.78
TPM3P06753 DUX4L14-201ENST00000621227 1267 ntBASIC26.2■■□□□ 1.78
TPM3P06753 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TPM3P06753 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
TPM3P06753 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
TPM3P06753 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
TPM3P06753 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.19■■□□□ 1.78
TPM3P06753 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TPM3P06753 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
TPM3P06753 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
TPM3P06753 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TPM3P06753 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TPM3P06753 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
TPM3P06753 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms