Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TFF1P04155 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TFF1P04155 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
TFF1P04155 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TFF1P04155 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.84■□□□□ 0.77
TFF1P04155 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TFF1P04155 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TFF1P04155 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TFF1P04155 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TFF1P04155 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
TFF1P04155 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TFF1P04155 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.83■□□□□ 0.77
TFF1P04155 TSPY13P-201ENST00000338964 914 ntBASIC19.83■□□□□ 0.77
TFF1P04155 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TFF1P04155 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.83■□□□□ 0.77
TFF1P04155 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TFF1P04155 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.83■□□□□ 0.77
TFF1P04155 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.83■□□□□ 0.77
TFF1P04155 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TFF1P04155 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TFF1P04155 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TFF1P04155 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TFF1P04155 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TFF1P04155 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TFF1P04155 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.82■□□□□ 0.76
TFF1P04155 AC087393.1-201ENST00000582896 145 ntBASIC19.82■□□□□ 0.76
TFF1P04155 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TFF1P04155 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TFF1P04155 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TFF1P04155 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TFF1P04155 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.81■□□□□ 0.76
TFF1P04155 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TFF1P04155 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TFF1P04155 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TFF1P04155 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TFF1P04155 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TFF1P04155 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TFF1P04155 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TFF1P04155 BHLHE23-202ENST00000612929 1109 ntBASIC19.8■□□□□ 0.76
TFF1P04155 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TFF1P04155 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TFF1P04155 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TFF1P04155 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TFF1P04155 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TFF1P04155 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TFF1P04155 AC139795.1-202ENST00000500444 432 ntBASIC19.79■□□□□ 0.76
TFF1P04155 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.79■□□□□ 0.76
TFF1P04155 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TFF1P04155 AC010980.1-201ENST00000587192 1142 ntBASIC19.79■□□□□ 0.76
TFF1P04155 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TFF1P04155 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TFF1P04155 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TFF1P04155 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TFF1P04155 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TFF1P04155 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TFF1P04155 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TFF1P04155 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.78■□□□□ 0.76
TFF1P04155 PVT1_1.1-201ENST00000615125 194 ntBASIC19.78■□□□□ 0.76
TFF1P04155 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TFF1P04155 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.78■□□□□ 0.76
TFF1P04155 FOXO3B-201ENST00000395675 1928 ntBASIC19.78■□□□□ 0.76
TFF1P04155 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TFF1P04155 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TFF1P04155 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.77■□□□□ 0.76
TFF1P04155 AC142381.3-201ENST00000568208 1670 ntBASIC19.77■□□□□ 0.76
TFF1P04155 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.77■□□□□ 0.75
TFF1P04155 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TFF1P04155 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.76■□□□□ 0.75
TFF1P04155 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
TFF1P04155 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.76■□□□□ 0.75
TFF1P04155 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.76■□□□□ 0.75
TFF1P04155 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.76■□□□□ 0.75
TFF1P04155 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.76■□□□□ 0.75
TFF1P04155 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TFF1P04155 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TFF1P04155 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TFF1P04155 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.76■□□□□ 0.75
TFF1P04155 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TFF1P04155 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.76■□□□□ 0.75
TFF1P04155 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TFF1P04155 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TFF1P04155 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TFF1P04155 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.75■□□□□ 0.75
TFF1P04155 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TFF1P04155 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.75■□□□□ 0.75
TFF1P04155 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TFF1P04155 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TFF1P04155 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TFF1P04155 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TFF1P04155 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TFF1P04155 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TFF1P04155 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TFF1P04155 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TFF1P04155 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.74■□□□□ 0.75
TFF1P04155 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TFF1P04155 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TFF1P04155 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.74■□□□□ 0.75
TFF1P04155 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.74■□□□□ 0.75
TFF1P04155 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TFF1P04155 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms