Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CASQ2O14958 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CASQ2O14958 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.39■■□□□ 1.17
CASQ2O14958 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CASQ2O14958 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CASQ2O14958 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CASQ2O14958 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.38■■□□□ 1.17
CASQ2O14958 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC22.38■■□□□ 1.17
CASQ2O14958 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CASQ2O14958 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CASQ2O14958 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CASQ2O14958 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CASQ2O14958 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CASQ2O14958 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASQ2O14958 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CASQ2O14958 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.37■■□□□ 1.17
CASQ2O14958 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CASQ2O14958 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.37■■□□□ 1.17
CASQ2O14958 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASQ2O14958 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASQ2O14958 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASQ2O14958 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CASQ2O14958 C9orf163-202ENST00000624034 2573 ntBASIC22.37■■□□□ 1.17
CASQ2O14958 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASQ2O14958 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.36■■□□□ 1.17
CASQ2O14958 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CASQ2O14958 AC004812.2-201ENST00000611079 2094 ntBASIC22.36■■□□□ 1.17
CASQ2O14958 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.36■■□□□ 1.17
CASQ2O14958 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
CASQ2O14958 SLC6A10P-202ENST00000431994 2058 ntBASIC22.35■■□□□ 1.17
CASQ2O14958 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CASQ2O14958 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CASQ2O14958 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CASQ2O14958 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CASQ2O14958 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CASQ2O14958 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CASQ2O14958 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CASQ2O14958 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
CASQ2O14958 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.34■■□□□ 1.17
CASQ2O14958 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CASQ2O14958 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CASQ2O14958 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CASQ2O14958 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CASQ2O14958 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.34■■□□□ 1.17
CASQ2O14958 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CASQ2O14958 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CASQ2O14958 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CASQ2O14958 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.33■■□□□ 1.17
CASQ2O14958 SETD8P1-201ENST00000623146 1180 ntBASIC22.33■■□□□ 1.17
CASQ2O14958 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CASQ2O14958 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CASQ2O14958 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
CASQ2O14958 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASQ2O14958 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASQ2O14958 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASQ2O14958 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASQ2O14958 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CASQ2O14958 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CASQ2O14958 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.32■■□□□ 1.16
CASQ2O14958 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASQ2O14958 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CASQ2O14958 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
CASQ2O14958 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CASQ2O14958 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CASQ2O14958 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CASQ2O14958 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CASQ2O14958 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CASQ2O14958 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
CASQ2O14958 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CASQ2O14958 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CASQ2O14958 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CASQ2O14958 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.3■■□□□ 1.16
CASQ2O14958 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CASQ2O14958 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CASQ2O14958 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CASQ2O14958 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.3■■□□□ 1.16
CASQ2O14958 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CASQ2O14958 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CASQ2O14958 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CASQ2O14958 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CASQ2O14958 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CASQ2O14958 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.29■■□□□ 1.16
CASQ2O14958 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CASQ2O14958 AC110285.7-201ENST00000624417 1536 ntBASIC22.29■■□□□ 1.16
CASQ2O14958 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CASQ2O14958 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CASQ2O14958 ABCB10P4-201ENST00000566803 2184 ntBASIC22.29■■□□□ 1.16
CASQ2O14958 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.29■■□□□ 1.16
CASQ2O14958 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CASQ2O14958 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CASQ2O14958 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CASQ2O14958 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CASQ2O14958 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CASQ2O14958 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CASQ2O14958 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CASQ2O14958 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.27■■□□□ 1.16
CASQ2O14958 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.27■■□□□ 1.16
CASQ2O14958 CAHM-201ENST00000604200 896 ntBASIC22.27■■□□□ 1.16
CASQ2O14958 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CASQ2O14958 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms