Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-4A0A0B4J246 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-4A0A0B4J246 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV8-4A0A0B4J246 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV8-4A0A0B4J246 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-4A0A0B4J246 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-4A0A0B4J246 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-4A0A0B4J246 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-4A0A0B4J246 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-4A0A0B4J246 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-4A0A0B4J246 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-4A0A0B4J246 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-4A0A0B4J246 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-4A0A0B4J246 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-4A0A0B4J246 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-4A0A0B4J246 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-4A0A0B4J246 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-4A0A0B4J246 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV8-4A0A0B4J246 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV8-4A0A0B4J246 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV8-4A0A0B4J246 AC010501.1-201ENST00000606270 1962 ntBASIC16.35■□□□□ 0.21
TRAV8-4A0A0B4J246 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-4A0A0B4J246 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-4A0A0B4J246 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-4A0A0B4J246 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV8-4A0A0B4J246 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV8-4A0A0B4J246 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-4A0A0B4J246 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TRAV8-4A0A0B4J246 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV8-4A0A0B4J246 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV8-4A0A0B4J246 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV8-4A0A0B4J246 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-4A0A0B4J246 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-4A0A0B4J246 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-4A0A0B4J246 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV8-4A0A0B4J246 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-4A0A0B4J246 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-4A0A0B4J246 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-4A0A0B4J246 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-4A0A0B4J246 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-4A0A0B4J246 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-4A0A0B4J246 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-4A0A0B4J246 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-4A0A0B4J246 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.32■□□□□ 0.2
TRAV8-4A0A0B4J246 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-4A0A0B4J246 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 AC060814.1-201ENST00000554326 538 ntBASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-4A0A0B4J246 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 MIR3960-201ENST00000583311 91 ntBASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-4A0A0B4J246 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.29■□□□□ 0.2
TRAV8-4A0A0B4J246 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-4A0A0B4J246 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV8-4A0A0B4J246 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-4A0A0B4J246 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-4A0A0B4J246 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-4A0A0B4J246 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV8-4A0A0B4J246 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV8-4A0A0B4J246 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms