Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV23-1A0A0A0MS06 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
TRBV23-1A0A0A0MS06 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRBV23-1A0A0A0MS06 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRBV23-1A0A0A0MS06 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRBV23-1A0A0A0MS06 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
TRBV23-1A0A0A0MS06 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 RPS2P7-201ENST00000447334 885 ntBASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 AC096887.2-201ENST00000623443 1957 ntBASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV23-1A0A0A0MS06 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV23-1A0A0A0MS06 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV23-1A0A0A0MS06 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV23-1A0A0A0MS06 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV23-1A0A0A0MS06 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
TRBV23-1A0A0A0MS06 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV23-1A0A0A0MS06 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV23-1A0A0A0MS06 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV23-1A0A0A0MS06 AC087393.1-201ENST00000582896 145 ntBASIC19.74■□□□□ 0.75
TRBV23-1A0A0A0MS06 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV23-1A0A0A0MS06 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV23-1A0A0A0MS06 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV23-1A0A0A0MS06 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV23-1A0A0A0MS06 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV23-1A0A0A0MS06 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV23-1A0A0A0MS06 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV23-1A0A0A0MS06 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
TRBV23-1A0A0A0MS06 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV23-1A0A0A0MS06 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV23-1A0A0A0MS06 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV23-1A0A0A0MS06 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV23-1A0A0A0MS06 AC139795.1-202ENST00000500444 432 ntBASIC19.72■□□□□ 0.75
TRBV23-1A0A0A0MS06 DUX4L18-201ENST00000553347 1267 ntBASIC19.72■□□□□ 0.75
TRBV23-1A0A0A0MS06 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV23-1A0A0A0MS06 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
TRBV23-1A0A0A0MS06 AC097639.1-201ENST00000565519 1891 ntBASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 AC074183.2-201ENST00000623112 922 ntBASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TRBV23-1A0A0A0MS06 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRBV23-1A0A0A0MS06 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.7■□□□□ 0.74
TRBV23-1A0A0A0MS06 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV23-1A0A0A0MS06 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV23-1A0A0A0MS06 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV23-1A0A0A0MS06 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.7■□□□□ 0.74
TRBV23-1A0A0A0MS06 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV23-1A0A0A0MS06 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV23-1A0A0A0MS06 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV23-1A0A0A0MS06 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV23-1A0A0A0MS06 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV23-1A0A0A0MS06 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBV23-1A0A0A0MS06 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBV23-1A0A0A0MS06 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV23-1A0A0A0MS06 AL033527.3-201ENST00000566366 1196 ntBASIC19.69■□□□□ 0.74
TRBV23-1A0A0A0MS06 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBV23-1A0A0A0MS06 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV23-1A0A0A0MS06 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRBV23-1A0A0A0MS06 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV23-1A0A0A0MS06 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBV23-1A0A0A0MS06 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBV23-1A0A0A0MS06 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV23-1A0A0A0MS06 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV23-1A0A0A0MS06 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV23-1A0A0A0MS06 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV23-1A0A0A0MS06 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV23-1A0A0A0MS06 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV23-1A0A0A0MS06 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRBV23-1A0A0A0MS06 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRBV23-1A0A0A0MS06 BHLHE23-202ENST00000612929 1109 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms