Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.86■■□□□ 1.09
HRH3Q9Y5N1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
HRH3Q9Y5N1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.85■■□□□ 1.09
HRH3Q9Y5N1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HRH3Q9Y5N1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HRH3Q9Y5N1 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.85■■□□□ 1.09
HRH3Q9Y5N1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
HRH3Q9Y5N1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
HRH3Q9Y5N1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.84■■□□□ 1.09
HRH3Q9Y5N1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HRH3Q9Y5N1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HRH3Q9Y5N1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HRH3Q9Y5N1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HRH3Q9Y5N1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.84■■□□□ 1.09
HRH3Q9Y5N1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HRH3Q9Y5N1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HRH3Q9Y5N1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HRH3Q9Y5N1 RPS2P7-201ENST00000447334 885 ntBASIC21.83■■□□□ 1.09
HRH3Q9Y5N1 AC009299.2-201ENST00000482477 511 ntBASIC21.83■■□□□ 1.09
HRH3Q9Y5N1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
HRH3Q9Y5N1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HRH3Q9Y5N1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 YBX1P4-201ENST00000392794 808 ntBASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 DUSP8P4-201ENST00000399538 1761 ntBASIC21.82■■□□□ 1.08
HRH3Q9Y5N1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.81■■□□□ 1.08
HRH3Q9Y5N1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HRH3Q9Y5N1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HRH3Q9Y5N1 MIR4508-201ENST00000584178 70 ntBASIC21.81■■□□□ 1.08
HRH3Q9Y5N1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
HRH3Q9Y5N1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.81■■□□□ 1.08
HRH3Q9Y5N1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HRH3Q9Y5N1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HRH3Q9Y5N1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
HRH3Q9Y5N1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 AC087393.1-201ENST00000582896 145 ntBASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HRH3Q9Y5N1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HRH3Q9Y5N1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.79■■□□□ 1.08
HRH3Q9Y5N1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.79■■□□□ 1.08
HRH3Q9Y5N1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.79■■□□□ 1.08
HRH3Q9Y5N1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.79■■□□□ 1.08
HRH3Q9Y5N1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HRH3Q9Y5N1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HRH3Q9Y5N1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 AC145676.1-201ENST00000514988 2004 ntBASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HRH3Q9Y5N1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HRH3Q9Y5N1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HRH3Q9Y5N1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HRH3Q9Y5N1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HRH3Q9Y5N1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HRH3Q9Y5N1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.77■■□□□ 1.08
HRH3Q9Y5N1 AC103724.3-201ENST00000564481 992 ntBASIC21.77■■□□□ 1.08
HRH3Q9Y5N1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HRH3Q9Y5N1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HRH3Q9Y5N1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HRH3Q9Y5N1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HRH3Q9Y5N1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.76■■□□□ 1.07
HRH3Q9Y5N1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HRH3Q9Y5N1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HRH3Q9Y5N1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HRH3Q9Y5N1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
HRH3Q9Y5N1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HRH3Q9Y5N1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.75■■□□□ 1.07
HRH3Q9Y5N1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HRH3Q9Y5N1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
HRH3Q9Y5N1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HRH3Q9Y5N1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HRH3Q9Y5N1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.74■■□□□ 1.07
HRH3Q9Y5N1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HRH3Q9Y5N1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HRH3Q9Y5N1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.74■■□□□ 1.07
HRH3Q9Y5N1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HRH3Q9Y5N1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms