Protein–RNA interactions for Protein: Q9Y5F1

PCDHB12, Protocadherin beta-12, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12Q9Y5F1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB12Q9Y5F1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.67■■□□□ 1.7
PCDHB12Q9Y5F1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
PCDHB12Q9Y5F1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB12Q9Y5F1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB12Q9Y5F1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDHB12Q9Y5F1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB12Q9Y5F1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PCDHB12Q9Y5F1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.65■■□□□ 1.7
PCDHB12Q9Y5F1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHB12Q9Y5F1 MIR4281-201ENST00000580852 62 ntBASIC25.65■■□□□ 1.7
PCDHB12Q9Y5F1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.65■■□□□ 1.7
PCDHB12Q9Y5F1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHB12Q9Y5F1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB12Q9Y5F1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB12Q9Y5F1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHB12Q9Y5F1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.64■■□□□ 1.7
PCDHB12Q9Y5F1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB12Q9Y5F1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.63■■□□□ 1.69
PCDHB12Q9Y5F1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHB12Q9Y5F1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.62■■□□□ 1.69
PCDHB12Q9Y5F1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB12Q9Y5F1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB12Q9Y5F1 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.62■■□□□ 1.69
PCDHB12Q9Y5F1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.62■■□□□ 1.69
PCDHB12Q9Y5F1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB12Q9Y5F1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB12Q9Y5F1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB12Q9Y5F1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
PCDHB12Q9Y5F1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB12Q9Y5F1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB12Q9Y5F1 AP004609.3-201ENST00000610705 1884 ntBASIC25.61■■□□□ 1.69
PCDHB12Q9Y5F1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHB12Q9Y5F1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB12Q9Y5F1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHB12Q9Y5F1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.6■■□□□ 1.69
PCDHB12Q9Y5F1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB12Q9Y5F1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB12Q9Y5F1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB12Q9Y5F1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB12Q9Y5F1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB12Q9Y5F1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHB12Q9Y5F1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.59■■□□□ 1.69
PCDHB12Q9Y5F1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.59■■□□□ 1.69
PCDHB12Q9Y5F1 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHB12Q9Y5F1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB12Q9Y5F1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PCDHB12Q9Y5F1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PCDHB12Q9Y5F1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
PCDHB12Q9Y5F1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDHB12Q9Y5F1 MIR638-201ENST00000385237 100 ntBASIC25.58■■□□□ 1.69
PCDHB12Q9Y5F1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHB12Q9Y5F1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.58■■□□□ 1.69
PCDHB12Q9Y5F1 AL139246.5-201ENST00000606645 996 ntBASIC25.58■■□□□ 1.69
PCDHB12Q9Y5F1 AC010997.5-201ENST00000609182 354 ntBASIC25.58■■□□□ 1.69
PCDHB12Q9Y5F1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHB12Q9Y5F1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
PCDHB12Q9Y5F1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
PCDHB12Q9Y5F1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB12Q9Y5F1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB12Q9Y5F1 AC131281.2-201ENST00000520478 145 ntBASIC25.57■■□□□ 1.68
PCDHB12Q9Y5F1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.57■■□□□ 1.68
PCDHB12Q9Y5F1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDHB12Q9Y5F1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDHB12Q9Y5F1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB12Q9Y5F1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHB12Q9Y5F1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHB12Q9Y5F1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHB12Q9Y5F1 AC011551.1-201ENST00000614101 683 ntBASIC25.56■■□□□ 1.68
PCDHB12Q9Y5F1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHB12Q9Y5F1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
PCDHB12Q9Y5F1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHB12Q9Y5F1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.55■■□□□ 1.68
PCDHB12Q9Y5F1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDHB12Q9Y5F1 MTDHP2-201ENST00000601468 714 ntBASIC25.55■■□□□ 1.68
PCDHB12Q9Y5F1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
PCDHB12Q9Y5F1 AL121749.1-202ENST00000609313 2153 ntBASIC25.55■■□□□ 1.68
PCDHB12Q9Y5F1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHB12Q9Y5F1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB12Q9Y5F1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB12Q9Y5F1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHB12Q9Y5F1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
PCDHB12Q9Y5F1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDHB12Q9Y5F1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHB12Q9Y5F1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 AL136116.3-201ENST00000402907 1138 ntBASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 MIR6724-1-201ENST00000616420 92 ntBASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 MIR6724-2-201ENST00000616483 92 ntBASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 MIR6724-4-201ENST00000617390 92 ntBASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 MIR6724-3-201ENST00000622482 92 ntBASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 AL117332.1-201ENST00000622628 974 ntBASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHB12Q9Y5F1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
PCDHB12Q9Y5F1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms