Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
BRD9Q9H8M2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.68■■□□□ 1.54
BRD9Q9H8M2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRD9Q9H8M2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
BRD9Q9H8M2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.68■■□□□ 1.54
BRD9Q9H8M2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.68■■□□□ 1.54
BRD9Q9H8M2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
BRD9Q9H8M2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
BRD9Q9H8M2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
BRD9Q9H8M2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.66■■□□□ 1.54
BRD9Q9H8M2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
BRD9Q9H8M2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
BRD9Q9H8M2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
BRD9Q9H8M2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
BRD9Q9H8M2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.65■■□□□ 1.54
BRD9Q9H8M2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
BRD9Q9H8M2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
BRD9Q9H8M2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
BRD9Q9H8M2 MIR4281-201ENST00000580852 62 ntBASIC24.64■■□□□ 1.54
BRD9Q9H8M2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.64■■□□□ 1.54
BRD9Q9H8M2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.64■■□□□ 1.53
BRD9Q9H8M2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
BRD9Q9H8M2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
BRD9Q9H8M2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.63■■□□□ 1.53
BRD9Q9H8M2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.63■■□□□ 1.53
BRD9Q9H8M2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BRD9Q9H8M2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BRD9Q9H8M2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD9Q9H8M2 AP004609.3-201ENST00000610705 1884 ntBASIC24.62■■□□□ 1.53
BRD9Q9H8M2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD9Q9H8M2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.62■■□□□ 1.53
BRD9Q9H8M2 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.62■■□□□ 1.53
BRD9Q9H8M2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.62■■□□□ 1.53
BRD9Q9H8M2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD9Q9H8M2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRD9Q9H8M2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
BRD9Q9H8M2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD9Q9H8M2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD9Q9H8M2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD9Q9H8M2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD9Q9H8M2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD9Q9H8M2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRD9Q9H8M2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.61■■□□□ 1.53
BRD9Q9H8M2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.61■■□□□ 1.53
BRD9Q9H8M2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRD9Q9H8M2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD9Q9H8M2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.6■■□□□ 1.53
BRD9Q9H8M2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.6■■□□□ 1.53
BRD9Q9H8M2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD9Q9H8M2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.6■■□□□ 1.53
BRD9Q9H8M2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRD9Q9H8M2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.6■■□□□ 1.53
BRD9Q9H8M2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.6■■□□□ 1.53
BRD9Q9H8M2 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.6■■□□□ 1.53
BRD9Q9H8M2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BRD9Q9H8M2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.59■■□□□ 1.53
BRD9Q9H8M2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD9Q9H8M2 MIR638-201ENST00000385237 100 ntBASIC24.59■■□□□ 1.53
BRD9Q9H8M2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.59■■□□□ 1.53
BRD9Q9H8M2 AC131281.2-201ENST00000520478 145 ntBASIC24.59■■□□□ 1.53
BRD9Q9H8M2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRD9Q9H8M2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD9Q9H8M2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
BRD9Q9H8M2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD9Q9H8M2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD9Q9H8M2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.58■■□□□ 1.53
BRD9Q9H8M2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.58■■□□□ 1.53
BRD9Q9H8M2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.58■■□□□ 1.53
BRD9Q9H8M2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
BRD9Q9H8M2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.52
BRD9Q9H8M2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
BRD9Q9H8M2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
BRD9Q9H8M2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
BRD9Q9H8M2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.57■■□□□ 1.52
BRD9Q9H8M2 AL139246.5-201ENST00000606645 996 ntBASIC24.57■■□□□ 1.52
BRD9Q9H8M2 AC010997.5-201ENST00000609182 354 ntBASIC24.57■■□□□ 1.52
BRD9Q9H8M2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
BRD9Q9H8M2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
BRD9Q9H8M2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
BRD9Q9H8M2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
BRD9Q9H8M2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
BRD9Q9H8M2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
BRD9Q9H8M2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
BRD9Q9H8M2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.55■■□□□ 1.52
BRD9Q9H8M2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
BRD9Q9H8M2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
BRD9Q9H8M2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.55■■□□□ 1.52
BRD9Q9H8M2 AL136116.3-201ENST00000402907 1138 ntBASIC24.55■■□□□ 1.52
BRD9Q9H8M2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.55■■□□□ 1.52
BRD9Q9H8M2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
BRD9Q9H8M2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.55■■□□□ 1.52
BRD9Q9H8M2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.55■■□□□ 1.52
BRD9Q9H8M2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
BRD9Q9H8M2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
BRD9Q9H8M2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
BRD9Q9H8M2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.54■■□□□ 1.52
BRD9Q9H8M2 MTDHP2-201ENST00000601468 714 ntBASIC24.54■■□□□ 1.52
BRD9Q9H8M2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
BRD9Q9H8M2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.53■■□□□ 1.52
BRD9Q9H8M2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms