Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
SCAF11Q99590 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC34.68■■■■□ 3.14
SCAF11Q99590 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
SCAF11Q99590 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC34.67■■■■□ 3.14
SCAF11Q99590 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC34.67■■■■□ 3.14
SCAF11Q99590 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
SCAF11Q99590 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC34.67■■■■□ 3.14
SCAF11Q99590 LSM4-201ENST00000252816 986 ntTSL 2 BASIC34.66■■■■□ 3.14
SCAF11Q99590 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC34.66■■■■□ 3.14
SCAF11Q99590 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
SCAF11Q99590 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
SCAF11Q99590 QDPR-206ENST00000508623 601 ntTSL 3 BASIC34.66■■■■□ 3.14
SCAF11Q99590 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC34.65■■■■□ 3.14
SCAF11Q99590 MTDHP2-201ENST00000601468 714 ntBASIC34.65■■■■□ 3.14
SCAF11Q99590 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC34.65■■■■□ 3.14
SCAF11Q99590 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SCAF11Q99590 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC34.65■■■■□ 3.14
SCAF11Q99590 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC34.65■■■■□ 3.14
SCAF11Q99590 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC34.64■■■■□ 3.14
SCAF11Q99590 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC34.63■■■■□ 3.13
SCAF11Q99590 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC34.63■■■■□ 3.13
SCAF11Q99590 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
SCAF11Q99590 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
SCAF11Q99590 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
SCAF11Q99590 SENP5-202ENST00000419026 973 ntTSL 3 BASIC34.63■■■■□ 3.13
SCAF11Q99590 ZNRF2P3-201ENST00000424200 374 ntBASIC34.63■■■■□ 3.13
SCAF11Q99590 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
SCAF11Q99590 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
SCAF11Q99590 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
SCAF11Q99590 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC34.62■■■■□ 3.13
SCAF11Q99590 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
SCAF11Q99590 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
SCAF11Q99590 EBPL-204ENST00000378272 766 ntTSL 3 BASIC34.59■■■■□ 3.13
SCAF11Q99590 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
SCAF11Q99590 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
SCAF11Q99590 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
SCAF11Q99590 SHF-206ENST00000560471 2499 ntTSL 5 BASIC34.59■■■■□ 3.13
SCAF11Q99590 AC092666.2-201ENST00000613287 246 ntBASIC34.58■■■■□ 3.13
SCAF11Q99590 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC34.58■■■■□ 3.13
SCAF11Q99590 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC34.58■■■■□ 3.13
SCAF11Q99590 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
SCAF11Q99590 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC34.58■■■■□ 3.13
SCAF11Q99590 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC34.58■■■■□ 3.13
SCAF11Q99590 AL356740.2-201ENST00000601559 647 ntBASIC34.58■■■■□ 3.13
SCAF11Q99590 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC34.57■■■■□ 3.13
SCAF11Q99590 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
SCAF11Q99590 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
SCAF11Q99590 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC34.56■■■■□ 3.12
SCAF11Q99590 AC026271.2-201ENST00000428091 497 ntBASIC34.56■■■■□ 3.12
SCAF11Q99590 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC34.56■■■■□ 3.12
SCAF11Q99590 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
SCAF11Q99590 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC34.55■■■■□ 3.12
SCAF11Q99590 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC34.55■■■■□ 3.12
SCAF11Q99590 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
SCAF11Q99590 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
SCAF11Q99590 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
SCAF11Q99590 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC34.54■■■■□ 3.12
SCAF11Q99590 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC34.54■■■■□ 3.12
SCAF11Q99590 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC34.54■■■■□ 3.12
SCAF11Q99590 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC34.54■■■■□ 3.12
SCAF11Q99590 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC34.54■■■■□ 3.12
SCAF11Q99590 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
SCAF11Q99590 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC34.53■■■■□ 3.12
SCAF11Q99590 EXOG-217ENST00000630638 197 ntTSL 5 BASIC34.53■■■■□ 3.12
SCAF11Q99590 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
SCAF11Q99590 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
SCAF11Q99590 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
SCAF11Q99590 RASSF1-AS1-201ENST00000629828 790 ntBASIC34.52■■■■□ 3.12
SCAF11Q99590 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC34.52■■■■□ 3.12
SCAF11Q99590 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC34.52■■■■□ 3.12
SCAF11Q99590 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
SCAF11Q99590 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
SCAF11Q99590 SHF-208ENST00000560734 1731 ntTSL 3 BASIC34.51■■■■□ 3.12
SCAF11Q99590 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.12
SCAF11Q99590 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC34.51■■■■□ 3.12
SCAF11Q99590 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC34.51■■■■□ 3.11
SCAF11Q99590 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC34.51■■■■□ 3.11
SCAF11Q99590 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
SCAF11Q99590 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC34.51■■■■□ 3.11
SCAF11Q99590 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
SCAF11Q99590 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC34.5■■■■□ 3.11
SCAF11Q99590 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
SCAF11Q99590 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC34.49■■■■□ 3.11
SCAF11Q99590 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
SCAF11Q99590 AC142472.1-201ENST00000612013 1741 ntBASIC34.49■■■■□ 3.11
SCAF11Q99590 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
SCAF11Q99590 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC34.48■■■■□ 3.11
SCAF11Q99590 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC34.48■■■■□ 3.11
SCAF11Q99590 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC34.48■■■■□ 3.11
SCAF11Q99590 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC34.47■■■■□ 3.11
SCAF11Q99590 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SCAF11Q99590 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC34.47■■■■□ 3.11
SCAF11Q99590 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
SCAF11Q99590 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
SCAF11Q99590 AC011551.1-201ENST00000614101 683 ntBASIC34.46■■■■□ 3.11
SCAF11Q99590 AC106739.1-201ENST00000617035 715 ntBASIC34.46■■■■□ 3.11
SCAF11Q99590 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC34.46■■■■□ 3.11
SCAF11Q99590 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC34.45■■■■□ 3.11
SCAF11Q99590 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC34.45■■■■□ 3.11
SCAF11Q99590 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC34.45■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms