Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4IP1Q8WWV3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.85■□□□□ 0.77
RTN4IP1Q8WWV3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.85■□□□□ 0.77
RTN4IP1Q8WWV3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4IP1Q8WWV3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.85■□□□□ 0.77
RTN4IP1Q8WWV3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4IP1Q8WWV3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4IP1Q8WWV3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4IP1Q8WWV3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4IP1Q8WWV3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RTN4IP1Q8WWV3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4IP1Q8WWV3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.84■□□□□ 0.77
RTN4IP1Q8WWV3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4IP1Q8WWV3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4IP1Q8WWV3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4IP1Q8WWV3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4IP1Q8WWV3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.84■□□□□ 0.77
RTN4IP1Q8WWV3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTN4IP1Q8WWV3 LINC01124-201ENST00000409786 2117 ntBASIC19.83■□□□□ 0.77
RTN4IP1Q8WWV3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RTN4IP1Q8WWV3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTN4IP1Q8WWV3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTN4IP1Q8WWV3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4IP1Q8WWV3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4IP1Q8WWV3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4IP1Q8WWV3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4IP1Q8WWV3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.83■□□□□ 0.76
RTN4IP1Q8WWV3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RTN4IP1Q8WWV3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
RTN4IP1Q8WWV3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 AL157400.5-201ENST00000507624 621 ntBASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 AC022413.1-201ENST00000624602 984 ntBASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.82■□□□□ 0.76
RTN4IP1Q8WWV3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 AP003733.4-201ENST00000623785 1697 ntBASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTN4IP1Q8WWV3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.8■□□□□ 0.76
RTN4IP1Q8WWV3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4IP1Q8WWV3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4IP1Q8WWV3 AC092296.2-201ENST00000589470 999 ntBASIC19.8■□□□□ 0.76
RTN4IP1Q8WWV3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RTN4IP1Q8WWV3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4IP1Q8WWV3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTN4IP1Q8WWV3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTN4IP1Q8WWV3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4IP1Q8WWV3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.78■□□□□ 0.76
RTN4IP1Q8WWV3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4IP1Q8WWV3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RTN4IP1Q8WWV3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
RTN4IP1Q8WWV3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4IP1Q8WWV3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4IP1Q8WWV3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RTN4IP1Q8WWV3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.77■□□□□ 0.76
RTN4IP1Q8WWV3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4IP1Q8WWV3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4IP1Q8WWV3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.77■□□□□ 0.76
RTN4IP1Q8WWV3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4IP1Q8WWV3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RTN4IP1Q8WWV3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4IP1Q8WWV3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms