Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
COL22A1Q8NFW1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
COL22A1Q8NFW1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
COL22A1Q8NFW1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
COL22A1Q8NFW1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
COL22A1Q8NFW1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC32.54■■■□□ 2.8
COL22A1Q8NFW1 GAK-223ENST00000628912 497 ntTSL 5 BASIC32.54■■■□□ 2.8
COL22A1Q8NFW1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC32.54■■■□□ 2.8
COL22A1Q8NFW1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
COL22A1Q8NFW1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
COL22A1Q8NFW1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
COL22A1Q8NFW1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC32.53■■■□□ 2.8
COL22A1Q8NFW1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC32.53■■■□□ 2.8
COL22A1Q8NFW1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
COL22A1Q8NFW1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC32.52■■■□□ 2.8
COL22A1Q8NFW1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC32.52■■■□□ 2.8
COL22A1Q8NFW1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC32.52■■■□□ 2.8
COL22A1Q8NFW1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC32.52■■■□□ 2.8
COL22A1Q8NFW1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
COL22A1Q8NFW1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC32.52■■■□□ 2.8
COL22A1Q8NFW1 AC105265.2-201ENST00000467189 838 ntBASIC32.51■■■□□ 2.8
COL22A1Q8NFW1 ANKRD20A6P-201ENST00000618763 204 ntBASIC32.51■■■□□ 2.8
COL22A1Q8NFW1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
COL22A1Q8NFW1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
COL22A1Q8NFW1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC32.51■■■□□ 2.8
COL22A1Q8NFW1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.79
COL22A1Q8NFW1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC32.5■■■□□ 2.79
COL22A1Q8NFW1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
COL22A1Q8NFW1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
COL22A1Q8NFW1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC32.5■■■□□ 2.79
COL22A1Q8NFW1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
COL22A1Q8NFW1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
COL22A1Q8NFW1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
COL22A1Q8NFW1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
COL22A1Q8NFW1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
COL22A1Q8NFW1 AF131216.4-201ENST00000638924 1588 ntBASIC32.5■■■□□ 2.79
COL22A1Q8NFW1 EDA-201ENST00000338901 1233 ntBASIC32.49■■■□□ 2.79
COL22A1Q8NFW1 AL136162.1-201ENST00000607711 1078 ntBASIC32.49■■■□□ 2.79
COL22A1Q8NFW1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC32.49■■■□□ 2.79
COL22A1Q8NFW1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
COL22A1Q8NFW1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.48■■■□□ 2.79
COL22A1Q8NFW1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC32.48■■■□□ 2.79
COL22A1Q8NFW1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
COL22A1Q8NFW1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
COL22A1Q8NFW1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.48■■■□□ 2.79
COL22A1Q8NFW1 UNC93B3-201ENST00000308076 687 ntBASIC32.48■■■□□ 2.79
COL22A1Q8NFW1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC32.48■■■□□ 2.79
COL22A1Q8NFW1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
COL22A1Q8NFW1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
COL22A1Q8NFW1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC32.47■■■□□ 2.79
COL22A1Q8NFW1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC32.46■■■□□ 2.79
COL22A1Q8NFW1 MIR6821-201ENST00000617625 74 ntBASIC32.46■■■□□ 2.79
COL22A1Q8NFW1 AL449106.1-201ENST00000608517 1980 ntBASIC32.46■■■□□ 2.79
COL22A1Q8NFW1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
COL22A1Q8NFW1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC32.45■■■□□ 2.79
COL22A1Q8NFW1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC32.45■■■□□ 2.79
COL22A1Q8NFW1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
COL22A1Q8NFW1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
COL22A1Q8NFW1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC32.44■■■□□ 2.78
COL22A1Q8NFW1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC32.43■■■□□ 2.78
COL22A1Q8NFW1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
COL22A1Q8NFW1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
COL22A1Q8NFW1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.43■■■□□ 2.78
COL22A1Q8NFW1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC32.42■■■□□ 2.78
COL22A1Q8NFW1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC32.42■■■□□ 2.78
COL22A1Q8NFW1 SNX5-217ENST00000606557 1087 ntBASIC32.42■■■□□ 2.78
COL22A1Q8NFW1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC32.42■■■□□ 2.78
COL22A1Q8NFW1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC32.41■■■□□ 2.78
COL22A1Q8NFW1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC32.41■■■□□ 2.78
COL22A1Q8NFW1 AC024257.2-201ENST00000549699 147 ntBASIC32.41■■■□□ 2.78
COL22A1Q8NFW1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC32.41■■■□□ 2.78
COL22A1Q8NFW1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
COL22A1Q8NFW1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL22A1Q8NFW1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
COL22A1Q8NFW1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC32.4■■■□□ 2.78
COL22A1Q8NFW1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC32.4■■■□□ 2.78
COL22A1Q8NFW1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL22A1Q8NFW1 AC097381.1-201ENST00000429019 1296 ntBASIC32.4■■■□□ 2.78
COL22A1Q8NFW1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.39■■■□□ 2.78
COL22A1Q8NFW1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
COL22A1Q8NFW1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC32.39■■■□□ 2.78
COL22A1Q8NFW1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL22A1Q8NFW1 MIR939-201ENST00000401314 82 ntBASIC32.37■■■□□ 2.77
COL22A1Q8NFW1 AP001330.3-201ENST00000520123 633 ntBASIC32.37■■■□□ 2.77
COL22A1Q8NFW1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC32.37■■■□□ 2.77
COL22A1Q8NFW1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC32.37■■■□□ 2.77
COL22A1Q8NFW1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
COL22A1Q8NFW1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
COL22A1Q8NFW1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
COL22A1Q8NFW1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
COL22A1Q8NFW1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
COL22A1Q8NFW1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
COL22A1Q8NFW1 AF213884.3-201ENST00000563833 479 ntBASIC32.35■■■□□ 2.77
COL22A1Q8NFW1 AL355001.2-201ENST00000620617 1191 ntBASIC32.35■■■□□ 2.77
COL22A1Q8NFW1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
COL22A1Q8NFW1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC32.34■■■□□ 2.77
COL22A1Q8NFW1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
COL22A1Q8NFW1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
COL22A1Q8NFW1 AL162430.1-201ENST00000480705 870 ntBASIC32.33■■■□□ 2.77
COL22A1Q8NFW1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms