Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL27A1Q8IZC6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.84■■□□□ 1.25
COL27A1Q8IZC6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL27A1Q8IZC6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.83■■□□□ 1.25
COL27A1Q8IZC6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.83■■□□□ 1.25
COL27A1Q8IZC6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL27A1Q8IZC6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
COL27A1Q8IZC6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 MIR6724-1-201ENST00000616420 92 ntBASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 MIR6724-2-201ENST00000616483 92 ntBASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 MIR6724-4-201ENST00000617390 92 ntBASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 MIR6724-3-201ENST00000622482 92 ntBASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
COL27A1Q8IZC6 AP004609.3-201ENST00000610705 1884 ntBASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
COL27A1Q8IZC6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL27A1Q8IZC6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 MIR3621-201ENST00000580529 85 ntBASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL27A1Q8IZC6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 AL136116.3-201ENST00000402907 1138 ntBASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 AF131216.4-201ENST00000638924 1588 ntBASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL27A1Q8IZC6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
COL27A1Q8IZC6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
COL27A1Q8IZC6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL27A1Q8IZC6 AL139246.5-201ENST00000606645 996 ntBASIC22.77■■□□□ 1.24
COL27A1Q8IZC6 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.77■■□□□ 1.24
COL27A1Q8IZC6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 MTDHP2-201ENST00000601468 714 ntBASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL27A1Q8IZC6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 AC010997.5-201ENST00000609182 354 ntBASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
COL27A1Q8IZC6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL27A1Q8IZC6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.74■■□□□ 1.23
COL27A1Q8IZC6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL27A1Q8IZC6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL27A1Q8IZC6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL27A1Q8IZC6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.72■■□□□ 1.23
COL27A1Q8IZC6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.71■■□□□ 1.23
COL27A1Q8IZC6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL27A1Q8IZC6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL27A1Q8IZC6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL27A1Q8IZC6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms