Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
LTN1O94822 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
LTN1O94822 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC32.1■■■□□ 2.73
LTN1O94822 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
LTN1O94822 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
LTN1O94822 SNAI3-AS1-204ENST00000567997 2048 ntBASIC32.1■■■□□ 2.73
LTN1O94822 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC32.1■■■□□ 2.73
LTN1O94822 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
LTN1O94822 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
LTN1O94822 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC32.09■■■□□ 2.73
LTN1O94822 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC32.09■■■□□ 2.73
LTN1O94822 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.09■■■□□ 2.73
LTN1O94822 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
LTN1O94822 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
LTN1O94822 SHF-208ENST00000560734 1731 ntTSL 3 BASIC32.09■■■□□ 2.73
LTN1O94822 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
LTN1O94822 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.09■■■□□ 2.73
LTN1O94822 AL117332.1-201ENST00000622628 974 ntBASIC32.09■■■□□ 2.73
LTN1O94822 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
LTN1O94822 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
LTN1O94822 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
LTN1O94822 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC32.08■■■□□ 2.73
LTN1O94822 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC32.07■■■□□ 2.72
LTN1O94822 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
LTN1O94822 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
LTN1O94822 AC142086.6-201ENST00000621154 1765 ntBASIC32.07■■■□□ 2.72
LTN1O94822 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
LTN1O94822 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
LTN1O94822 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
LTN1O94822 MIR638-201ENST00000385237 100 ntBASIC32.06■■■□□ 2.72
LTN1O94822 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.06■■■□□ 2.72
LTN1O94822 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
LTN1O94822 PEMT-206ENST00000435340 960 ntTSL 5 BASIC32.04■■■□□ 2.72
LTN1O94822 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC32.04■■■□□ 2.72
LTN1O94822 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
LTN1O94822 SRR-208ENST00000576848 588 ntTSL 4 BASIC32.04■■■□□ 2.72
LTN1O94822 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC32.03■■■□□ 2.72
LTN1O94822 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC32.03■■■□□ 2.72
LTN1O94822 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
LTN1O94822 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
LTN1O94822 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC32.03■■■□□ 2.72
LTN1O94822 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC32.02■■■□□ 2.72
LTN1O94822 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
LTN1O94822 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
LTN1O94822 MTDHP2-201ENST00000601468 714 ntBASIC32.02■■■□□ 2.72
LTN1O94822 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
LTN1O94822 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.01■■■□□ 2.71
LTN1O94822 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC32.01■■■□□ 2.71
LTN1O94822 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC32.01■■■□□ 2.71
LTN1O94822 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC32.01■■■□□ 2.71
LTN1O94822 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC32.01■■■□□ 2.71
LTN1O94822 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
LTN1O94822 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
LTN1O94822 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
LTN1O94822 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
LTN1O94822 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC32■■■□□ 2.71
LTN1O94822 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
LTN1O94822 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
LTN1O94822 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.99■■■□□ 2.71
LTN1O94822 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.99■■■□□ 2.71
LTN1O94822 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC31.99■■■□□ 2.71
LTN1O94822 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
LTN1O94822 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.99■■■□□ 2.71
LTN1O94822 MIR6724-1-201ENST00000616420 92 ntBASIC31.99■■■□□ 2.71
LTN1O94822 MIR6724-2-201ENST00000616483 92 ntBASIC31.99■■■□□ 2.71
LTN1O94822 MIR6724-4-201ENST00000617390 92 ntBASIC31.99■■■□□ 2.71
LTN1O94822 MIR6724-3-201ENST00000622482 92 ntBASIC31.99■■■□□ 2.71
LTN1O94822 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
LTN1O94822 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.98■■■□□ 2.71
LTN1O94822 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
LTN1O94822 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.98■■■□□ 2.71
LTN1O94822 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
LTN1O94822 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.98■■■□□ 2.71
LTN1O94822 AL512631.2-201ENST00000604634 923 ntBASIC31.98■■■□□ 2.71
LTN1O94822 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
LTN1O94822 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
LTN1O94822 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC31.97■■■□□ 2.71
LTN1O94822 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.97■■■□□ 2.71
LTN1O94822 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
LTN1O94822 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
LTN1O94822 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.96■■■□□ 2.71
LTN1O94822 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.96■■■□□ 2.71
LTN1O94822 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
LTN1O94822 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.95■■■□□ 2.71
LTN1O94822 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
LTN1O94822 AF131216.4-201ENST00000638924 1588 ntBASIC31.95■■■□□ 2.7
LTN1O94822 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
LTN1O94822 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
LTN1O94822 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
LTN1O94822 GAK-223ENST00000628912 497 ntTSL 5 BASIC31.94■■■□□ 2.7
LTN1O94822 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
LTN1O94822 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC31.94■■■□□ 2.7
LTN1O94822 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
LTN1O94822 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
LTN1O94822 MIR4466-201ENST00000606121 54 ntBASIC31.94■■■□□ 2.7
LTN1O94822 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
LTN1O94822 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
LTN1O94822 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.93■■■□□ 2.7
LTN1O94822 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
LTN1O94822 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms