Protein–RNA interactions for Protein: O15164

TRIM24, Transcription intermediary factor 1-alpha, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24O15164 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM24O15164 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
TRIM24O15164 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM24O15164 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM24O15164 KRT18P10-201ENST00000388836 1287 ntBASIC24.51■■□□□ 1.51
TRIM24O15164 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
TRIM24O15164 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.5■■□□□ 1.51
TRIM24O15164 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
TRIM24O15164 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.5■■□□□ 1.51
TRIM24O15164 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM24O15164 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TRIM24O15164 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM24O15164 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.49■■□□□ 1.51
TRIM24O15164 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM24O15164 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM24O15164 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM24O15164 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM24O15164 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIM24O15164 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.49■■□□□ 1.51
TRIM24O15164 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM24O15164 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM24O15164 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.48■■□□□ 1.51
TRIM24O15164 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.48■■□□□ 1.51
TRIM24O15164 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.48■■□□□ 1.51
TRIM24O15164 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.48■■□□□ 1.51
TRIM24O15164 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM24O15164 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIM24O15164 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.47■■□□□ 1.51
TRIM24O15164 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM24O15164 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
TRIM24O15164 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
TRIM24O15164 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.47■■□□□ 1.51
TRIM24O15164 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM24O15164 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.47■■□□□ 1.51
TRIM24O15164 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.47■■□□□ 1.51
TRIM24O15164 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
TRIM24O15164 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TRIM24O15164 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.46■■□□□ 1.51
TRIM24O15164 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM24O15164 THA1P-201ENST00000590384 1145 ntBASIC24.46■■□□□ 1.51
TRIM24O15164 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIM24O15164 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
TRIM24O15164 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
TRIM24O15164 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRIM24O15164 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRIM24O15164 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
TRIM24O15164 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRIM24O15164 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRIM24O15164 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TRIM24O15164 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.44■■□□□ 1.5
TRIM24O15164 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIM24O15164 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIM24O15164 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
TRIM24O15164 AC131212.1-201ENST00000613771 668 ntBASIC24.44■■□□□ 1.5
TRIM24O15164 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIM24O15164 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
TRIM24O15164 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM24O15164 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.43■■□□□ 1.5
TRIM24O15164 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.43■■□□□ 1.5
TRIM24O15164 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM24O15164 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIM24O15164 AC022616.5-201ENST00000518796 181 ntBASIC24.43■■□□□ 1.5
TRIM24O15164 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
TRIM24O15164 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM24O15164 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.42■■□□□ 1.5
TRIM24O15164 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TRIM24O15164 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.42■■□□□ 1.5
TRIM24O15164 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
TRIM24O15164 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.42■■□□□ 1.5
TRIM24O15164 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.42■■□□□ 1.5
TRIM24O15164 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIM24O15164 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
TRIM24O15164 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM24O15164 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM24O15164 KRT18P24-201ENST00000344739 1156 ntBASIC24.41■■□□□ 1.5
TRIM24O15164 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRIM24O15164 AL356441.2-201ENST00000443009 864 ntBASIC24.41■■□□□ 1.5
TRIM24O15164 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.41■■□□□ 1.5
TRIM24O15164 AC120024.1-201ENST00000562672 995 ntBASIC24.41■■□□□ 1.5
TRIM24O15164 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM24O15164 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
TRIM24O15164 AL592295.1-201ENST00000400984 884 ntBASIC24.4■■□□□ 1.5
TRIM24O15164 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM24O15164 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM24O15164 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM24O15164 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
TRIM24O15164 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM24O15164 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM24O15164 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.4■■□□□ 1.5
TRIM24O15164 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TRIM24O15164 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.39■■□□□ 1.5
TRIM24O15164 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
TRIM24O15164 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM24O15164 Z92544.1-202ENST00000571933 1220 ntBASIC24.39■■□□□ 1.49
TRIM24O15164 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
TRIM24O15164 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.39■■□□□ 1.49
TRIM24O15164 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM24O15164 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM24O15164 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.38■■□□□ 1.49
TRIM24O15164 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms