Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-5A0A0J9YX44 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
TRBV5-5A0A0J9YX44 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV5-5A0A0J9YX44 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRBV5-5A0A0J9YX44 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV5-5A0A0J9YX44 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV5-5A0A0J9YX44 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.65■□□□□ 0.9
TRBV5-5A0A0J9YX44 RPS2P35-201ENST00000443417 897 ntBASIC20.65■□□□□ 0.9
TRBV5-5A0A0J9YX44 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.65■□□□□ 0.9
TRBV5-5A0A0J9YX44 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRBV5-5A0A0J9YX44 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV5-5A0A0J9YX44 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.64■□□□□ 0.9
TRBV5-5A0A0J9YX44 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.64■□□□□ 0.89
TRBV5-5A0A0J9YX44 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TRBV5-5A0A0J9YX44 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV5-5A0A0J9YX44 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV5-5A0A0J9YX44 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV5-5A0A0J9YX44 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-5A0A0J9YX44 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRBV5-5A0A0J9YX44 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-5A0A0J9YX44 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-5A0A0J9YX44 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.63■□□□□ 0.89
TRBV5-5A0A0J9YX44 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-5A0A0J9YX44 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-5A0A0J9YX44 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-5A0A0J9YX44 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-5A0A0J9YX44 AC012676.1-201ENST00000574705 1949 ntBASIC20.63■□□□□ 0.89
TRBV5-5A0A0J9YX44 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-5A0A0J9YX44 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.62■□□□□ 0.89
TRBV5-5A0A0J9YX44 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.62■□□□□ 0.89
TRBV5-5A0A0J9YX44 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-5A0A0J9YX44 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.62■□□□□ 0.89
TRBV5-5A0A0J9YX44 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV5-5A0A0J9YX44 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
TRBV5-5A0A0J9YX44 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-5A0A0J9YX44 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.62■□□□□ 0.89
TRBV5-5A0A0J9YX44 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV5-5A0A0J9YX44 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-5A0A0J9YX44 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-5A0A0J9YX44 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-5A0A0J9YX44 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-5A0A0J9YX44 AC133561.1-201ENST00000568600 2415 ntBASIC20.61■□□□□ 0.89
TRBV5-5A0A0J9YX44 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.61■□□□□ 0.89
TRBV5-5A0A0J9YX44 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.61■□□□□ 0.89
TRBV5-5A0A0J9YX44 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRBV5-5A0A0J9YX44 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-5A0A0J9YX44 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-5A0A0J9YX44 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.6■□□□□ 0.89
TRBV5-5A0A0J9YX44 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV5-5A0A0J9YX44 ZNRF2P2-203ENST00000454624 420 ntBASIC20.6■□□□□ 0.89
TRBV5-5A0A0J9YX44 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRBV5-5A0A0J9YX44 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 MIR6089-201ENST00000616698 64 ntBASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 CR559946.2-201ENST00000623684 991 ntBASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRBV5-5A0A0J9YX44 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TRBV5-5A0A0J9YX44 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV5-5A0A0J9YX44 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBV5-5A0A0J9YX44 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBV5-5A0A0J9YX44 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV5-5A0A0J9YX44 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRBV5-5A0A0J9YX44 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRBV5-5A0A0J9YX44 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.57■□□□□ 0.88
TRBV5-5A0A0J9YX44 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-5A0A0J9YX44 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV5-5A0A0J9YX44 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV5-5A0A0J9YX44 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-5A0A0J9YX44 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-5A0A0J9YX44 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV5-5A0A0J9YX44 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-5A0A0J9YX44 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-5A0A0J9YX44 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-5A0A0J9YX44 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-5A0A0J9YX44 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-5A0A0J9YX44 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-5A0A0J9YX44 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-5A0A0J9YX44 AC068473.5-201ENST00000616428 2072 ntBASIC20.55■□□□□ 0.88
TRBV5-5A0A0J9YX44 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-5A0A0J9YX44 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBV5-5A0A0J9YX44 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.55■□□□□ 0.88
TRBV5-5A0A0J9YX44 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBV5-5A0A0J9YX44 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBV5-5A0A0J9YX44 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBV5-5A0A0J9YX44 AC004812.2-201ENST00000611079 2094 ntBASIC20.55■□□□□ 0.88
TRBV5-5A0A0J9YX44 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBV5-5A0A0J9YX44 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms