Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
PCDHAC2Q9Y5I4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHAC2Q9Y5I4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.86■■■□□ 2.21
PCDHAC2Q9Y5I4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHAC2Q9Y5I4 AP004609.3-201ENST00000610705 1884 ntBASIC28.85■■■□□ 2.21
PCDHAC2Q9Y5I4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHAC2Q9Y5I4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.85■■■□□ 2.21
PCDHAC2Q9Y5I4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHAC2Q9Y5I4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHAC2Q9Y5I4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHAC2Q9Y5I4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHAC2Q9Y5I4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCDHAC2Q9Y5I4 TSPY9P-201ENST00000440215 945 ntBASIC28.84■■■□□ 2.21
PCDHAC2Q9Y5I4 TSPY11P-201ENST00000442607 1045 ntBASIC28.84■■■□□ 2.21
PCDHAC2Q9Y5I4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.84■■■□□ 2.21
PCDHAC2Q9Y5I4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
PCDHAC2Q9Y5I4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCDHAC2Q9Y5I4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCDHAC2Q9Y5I4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.83■■■□□ 2.21
PCDHAC2Q9Y5I4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.83■■■□□ 2.21
PCDHAC2Q9Y5I4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.83■■■□□ 2.21
PCDHAC2Q9Y5I4 AC137630.3-201ENST00000607245 391 ntBASIC28.83■■■□□ 2.21
PCDHAC2Q9Y5I4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCDHAC2Q9Y5I4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.83■■■□□ 2.2
PCDHAC2Q9Y5I4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCDHAC2Q9Y5I4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
PCDHAC2Q9Y5I4 KRT16P3-201ENST00000439127 1283 ntBASIC28.82■■■□□ 2.2
PCDHAC2Q9Y5I4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.82■■■□□ 2.2
PCDHAC2Q9Y5I4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCDHAC2Q9Y5I4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCDHAC2Q9Y5I4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PCDHAC2Q9Y5I4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.81■■■□□ 2.2
PCDHAC2Q9Y5I4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PCDHAC2Q9Y5I4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.81■■■□□ 2.2
PCDHAC2Q9Y5I4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.81■■■□□ 2.2
PCDHAC2Q9Y5I4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
PCDHAC2Q9Y5I4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
PCDHAC2Q9Y5I4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.8■■■□□ 2.2
PCDHAC2Q9Y5I4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PCDHAC2Q9Y5I4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
PCDHAC2Q9Y5I4 AC021242.3-201ENST00000607598 1377 ntBASIC28.8■■■□□ 2.2
PCDHAC2Q9Y5I4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PCDHAC2Q9Y5I4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.8■■■□□ 2.2
PCDHAC2Q9Y5I4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCDHAC2Q9Y5I4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
PCDHAC2Q9Y5I4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
PCDHAC2Q9Y5I4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PCDHAC2Q9Y5I4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PCDHAC2Q9Y5I4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.79■■■□□ 2.2
PCDHAC2Q9Y5I4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28.79■■■□□ 2.2
PCDHAC2Q9Y5I4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PCDHAC2Q9Y5I4 KRT18P10-201ENST00000388836 1287 ntBASIC28.79■■■□□ 2.2
PCDHAC2Q9Y5I4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.78■■■□□ 2.2
PCDHAC2Q9Y5I4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PCDHAC2Q9Y5I4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
PCDHAC2Q9Y5I4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PCDHAC2Q9Y5I4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.77■■■□□ 2.2
PCDHAC2Q9Y5I4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
PCDHAC2Q9Y5I4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
PCDHAC2Q9Y5I4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28.77■■■□□ 2.2
PCDHAC2Q9Y5I4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PCDHAC2Q9Y5I4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PCDHAC2Q9Y5I4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.75■■■□□ 2.19
PCDHAC2Q9Y5I4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHAC2Q9Y5I4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHAC2Q9Y5I4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.75■■■□□ 2.19
PCDHAC2Q9Y5I4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
PCDHAC2Q9Y5I4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.74■■■□□ 2.19
PCDHAC2Q9Y5I4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PCDHAC2Q9Y5I4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.73■■■□□ 2.19
PCDHAC2Q9Y5I4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.73■■■□□ 2.19
PCDHAC2Q9Y5I4 MIR4281-201ENST00000580852 62 ntBASIC28.72■■■□□ 2.19
PCDHAC2Q9Y5I4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.72■■■□□ 2.19
PCDHAC2Q9Y5I4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.72■■■□□ 2.19
PCDHAC2Q9Y5I4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.72■■■□□ 2.19
PCDHAC2Q9Y5I4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCDHAC2Q9Y5I4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PCDHAC2Q9Y5I4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.71■■■□□ 2.19
PCDHAC2Q9Y5I4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.7■■■□□ 2.19
PCDHAC2Q9Y5I4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
PCDHAC2Q9Y5I4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.7■■■□□ 2.18
PCDHAC2Q9Y5I4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.7■■■□□ 2.18
PCDHAC2Q9Y5I4 AC092028.1-203ENST00000608262 953 ntBASIC28.7■■■□□ 2.18
PCDHAC2Q9Y5I4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
PCDHAC2Q9Y5I4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
PCDHAC2Q9Y5I4 MIR935-201ENST00000401179 91 ntBASIC28.69■■■□□ 2.18
PCDHAC2Q9Y5I4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.68■■■□□ 2.18
PCDHAC2Q9Y5I4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.68■■■□□ 2.18
PCDHAC2Q9Y5I4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCDHAC2Q9Y5I4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PCDHAC2Q9Y5I4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCDHAC2Q9Y5I4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PCDHAC2Q9Y5I4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PCDHAC2Q9Y5I4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.67■■■□□ 2.18
PCDHAC2Q9Y5I4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.67■■■□□ 2.18
PCDHAC2Q9Y5I4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC28.67■■■□□ 2.18
PCDHAC2Q9Y5I4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PCDHAC2Q9Y5I4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHAC2Q9Y5I4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHAC2Q9Y5I4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms