Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
YME1L1Q96TA2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.93■■□□□ 1.74
YME1L1Q96TA2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
YME1L1Q96TA2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.92■■□□□ 1.74
YME1L1Q96TA2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.92■■□□□ 1.74
YME1L1Q96TA2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
YME1L1Q96TA2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.92■■□□□ 1.74
YME1L1Q96TA2 AC131281.2-201ENST00000520478 145 ntBASIC25.92■■□□□ 1.74
YME1L1Q96TA2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
YME1L1Q96TA2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
YME1L1Q96TA2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.91■■□□□ 1.74
YME1L1Q96TA2 DRD5P2-201ENST00000421395 2012 ntBASIC25.91■■□□□ 1.74
YME1L1Q96TA2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
YME1L1Q96TA2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
YME1L1Q96TA2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
YME1L1Q96TA2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.9■■□□□ 1.74
YME1L1Q96TA2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
YME1L1Q96TA2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
YME1L1Q96TA2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
YME1L1Q96TA2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.9■■□□□ 1.74
YME1L1Q96TA2 MIR4281-201ENST00000580852 62 ntBASIC25.9■■□□□ 1.74
YME1L1Q96TA2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.9■■□□□ 1.74
YME1L1Q96TA2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
YME1L1Q96TA2 LINC01003-201ENST00000564834 1764 ntBASIC25.9■■□□□ 1.74
YME1L1Q96TA2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
YME1L1Q96TA2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
YME1L1Q96TA2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
YME1L1Q96TA2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.89■■□□□ 1.73
YME1L1Q96TA2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
YME1L1Q96TA2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
YME1L1Q96TA2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
YME1L1Q96TA2 AL136116.3-201ENST00000402907 1138 ntBASIC25.88■■□□□ 1.73
YME1L1Q96TA2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
YME1L1Q96TA2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
YME1L1Q96TA2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
YME1L1Q96TA2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
YME1L1Q96TA2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
YME1L1Q96TA2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.87■■□□□ 1.73
YME1L1Q96TA2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.87■■□□□ 1.73
YME1L1Q96TA2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
YME1L1Q96TA2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
YME1L1Q96TA2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
YME1L1Q96TA2 AC010997.5-201ENST00000609182 354 ntBASIC25.86■■□□□ 1.73
YME1L1Q96TA2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
YME1L1Q96TA2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
YME1L1Q96TA2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
YME1L1Q96TA2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
YME1L1Q96TA2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
YME1L1Q96TA2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.85■■□□□ 1.73
YME1L1Q96TA2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
YME1L1Q96TA2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
YME1L1Q96TA2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.84■■□□□ 1.73
YME1L1Q96TA2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.84■■□□□ 1.73
YME1L1Q96TA2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.84■■□□□ 1.73
YME1L1Q96TA2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
YME1L1Q96TA2 AL117332.1-201ENST00000622628 974 ntBASIC25.84■■□□□ 1.73
YME1L1Q96TA2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
YME1L1Q96TA2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
YME1L1Q96TA2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
YME1L1Q96TA2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.84■■□□□ 1.73
YME1L1Q96TA2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
YME1L1Q96TA2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
YME1L1Q96TA2 AC142472.1-201ENST00000612013 1741 ntBASIC25.83■■□□□ 1.73
YME1L1Q96TA2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
YME1L1Q96TA2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.83■■□□□ 1.73
YME1L1Q96TA2 MTDHP2-201ENST00000601468 714 ntBASIC25.83■■□□□ 1.73
YME1L1Q96TA2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.83■■□□□ 1.73
YME1L1Q96TA2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.83■■□□□ 1.73
YME1L1Q96TA2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
YME1L1Q96TA2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.82■■□□□ 1.72
YME1L1Q96TA2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
YME1L1Q96TA2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
YME1L1Q96TA2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.82■■□□□ 1.72
YME1L1Q96TA2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.82■■□□□ 1.72
YME1L1Q96TA2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.82■■□□□ 1.72
YME1L1Q96TA2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
YME1L1Q96TA2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.81■■□□□ 1.72
YME1L1Q96TA2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
YME1L1Q96TA2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.81■■□□□ 1.72
YME1L1Q96TA2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
YME1L1Q96TA2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.81■■□□□ 1.72
YME1L1Q96TA2 MIR6724-1-201ENST00000616420 92 ntBASIC25.8■■□□□ 1.72
YME1L1Q96TA2 MIR6724-2-201ENST00000616483 92 ntBASIC25.8■■□□□ 1.72
YME1L1Q96TA2 MIR6724-4-201ENST00000617390 92 ntBASIC25.8■■□□□ 1.72
YME1L1Q96TA2 MIR6724-3-201ENST00000622482 92 ntBASIC25.8■■□□□ 1.72
YME1L1Q96TA2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
YME1L1Q96TA2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
YME1L1Q96TA2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
YME1L1Q96TA2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
YME1L1Q96TA2 MIR3621-201ENST00000580529 85 ntBASIC25.79■■□□□ 1.72
YME1L1Q96TA2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
YME1L1Q96TA2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
YME1L1Q96TA2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.79■■□□□ 1.72
YME1L1Q96TA2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
YME1L1Q96TA2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
YME1L1Q96TA2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
YME1L1Q96TA2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.78■■□□□ 1.72
YME1L1Q96TA2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.78■■□□□ 1.72
YME1L1Q96TA2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
YME1L1Q96TA2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms