Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.03■■□□□ 1.28
CNTNAP3BQ96NU0 AL136967.2-201ENST00000623968 743 ntBASIC23.03■■□□□ 1.28
CNTNAP3BQ96NU0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CNTNAP3BQ96NU0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.02■■□□□ 1.28
CNTNAP3BQ96NU0 AC139426.1-201ENST00000568218 2529 ntBASIC23.02■■□□□ 1.28
CNTNAP3BQ96NU0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
CNTNAP3BQ96NU0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.02■■□□□ 1.28
CNTNAP3BQ96NU0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNTNAP3BQ96NU0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNTNAP3BQ96NU0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.01■■□□□ 1.27
CNTNAP3BQ96NU0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.01■■□□□ 1.27
CNTNAP3BQ96NU0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.01■■□□□ 1.27
CNTNAP3BQ96NU0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CNTNAP3BQ96NU0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNTNAP3BQ96NU0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CNTNAP3BQ96NU0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP3BQ96NU0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP3BQ96NU0 AC120024.1-201ENST00000562672 995 ntBASIC23■■□□□ 1.27
CNTNAP3BQ96NU0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23■■□□□ 1.27
CNTNAP3BQ96NU0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 AC024257.2-201ENST00000549699 147 ntBASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 AF213884.3-201ENST00000563833 479 ntBASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 AC022517.1-201ENST00000592429 346 ntBASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNTNAP3BQ96NU0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.98■■□□□ 1.27
CNTNAP3BQ96NU0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
CNTNAP3BQ96NU0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNTNAP3BQ96NU0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CNTNAP3BQ96NU0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CNTNAP3BQ96NU0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
CNTNAP3BQ96NU0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CNTNAP3BQ96NU0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNTNAP3BQ96NU0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.98■■□□□ 1.27
CNTNAP3BQ96NU0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CNTNAP3BQ96NU0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CNTNAP3BQ96NU0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CNTNAP3BQ96NU0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.97■■□□□ 1.27
CNTNAP3BQ96NU0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.97■■□□□ 1.27
CNTNAP3BQ96NU0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.97■■□□□ 1.27
CNTNAP3BQ96NU0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.97■■□□□ 1.27
CNTNAP3BQ96NU0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CNTNAP3BQ96NU0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.96■■□□□ 1.27
CNTNAP3BQ96NU0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CNTNAP3BQ96NU0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CNTNAP3BQ96NU0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CNTNAP3BQ96NU0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CNTNAP3BQ96NU0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CNTNAP3BQ96NU0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CNTNAP3BQ96NU0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CNTNAP3BQ96NU0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CNTNAP3BQ96NU0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.94■■□□□ 1.26
CNTNAP3BQ96NU0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.94■■□□□ 1.26
CNTNAP3BQ96NU0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CNTNAP3BQ96NU0 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.94■■□□□ 1.26
CNTNAP3BQ96NU0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CNTNAP3BQ96NU0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.94■■□□□ 1.26
CNTNAP3BQ96NU0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNTNAP3BQ96NU0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CNTNAP3BQ96NU0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNTNAP3BQ96NU0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CNTNAP3BQ96NU0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNTNAP3BQ96NU0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.92■■□□□ 1.26
CNTNAP3BQ96NU0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNTNAP3BQ96NU0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP3BQ96NU0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.91■■□□□ 1.26
CNTNAP3BQ96NU0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP3BQ96NU0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP3BQ96NU0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP3BQ96NU0 MIR939-201ENST00000401314 82 ntBASIC22.91■■□□□ 1.26
CNTNAP3BQ96NU0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CNTNAP3BQ96NU0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CNTNAP3BQ96NU0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.91■■□□□ 1.26
CNTNAP3BQ96NU0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
CNTNAP3BQ96NU0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNTNAP3BQ96NU0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
CNTNAP3BQ96NU0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNTNAP3BQ96NU0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CNTNAP3BQ96NU0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.89■■□□□ 1.25
CNTNAP3BQ96NU0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNTNAP3BQ96NU0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.89■■□□□ 1.25
CNTNAP3BQ96NU0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.89■■□□□ 1.25
CNTNAP3BQ96NU0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNTNAP3BQ96NU0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNTNAP3BQ96NU0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNTNAP3BQ96NU0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.88■■□□□ 1.25
CNTNAP3BQ96NU0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CNTNAP3BQ96NU0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.88■■□□□ 1.25
CNTNAP3BQ96NU0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNTNAP3BQ96NU0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNTNAP3BQ96NU0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
CNTNAP3BQ96NU0 AC092437.1-201ENST00000624794 1048 ntBASIC22.87■■□□□ 1.25
CNTNAP3BQ96NU0 ABCB10P1-201ENST00000614297 2181 ntBASIC22.87■■□□□ 1.25
CNTNAP3BQ96NU0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.87■■□□□ 1.25
CNTNAP3BQ96NU0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 230.2 ms