Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.72■■□□□ 1.07
SNRNP40Q96DI7 AC131281.2-201ENST00000520478 145 ntBASIC21.72■■□□□ 1.07
SNRNP40Q96DI7 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.72■■□□□ 1.07
SNRNP40Q96DI7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SNRNP40Q96DI7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRNP40Q96DI7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRNP40Q96DI7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNRNP40Q96DI7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNRNP40Q96DI7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SNRNP40Q96DI7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP40Q96DI7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SNRNP40Q96DI7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP40Q96DI7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.7■■□□□ 1.06
SNRNP40Q96DI7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.7■■□□□ 1.06
SNRNP40Q96DI7 BX255925.1-201ENST00000566954 1854 ntBASIC21.69■■□□□ 1.06
SNRNP40Q96DI7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.69■■□□□ 1.06
SNRNP40Q96DI7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRNP40Q96DI7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SNRNP40Q96DI7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SNRNP40Q96DI7 AL136116.3-201ENST00000402907 1138 ntBASIC21.68■■□□□ 1.06
SNRNP40Q96DI7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.68■■□□□ 1.06
SNRNP40Q96DI7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
SNRNP40Q96DI7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNRNP40Q96DI7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SNRNP40Q96DI7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.68■■□□□ 1.06
SNRNP40Q96DI7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP40Q96DI7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
SNRNP40Q96DI7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP40Q96DI7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP40Q96DI7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.67■■□□□ 1.06
SNRNP40Q96DI7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP40Q96DI7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.67■■□□□ 1.06
SNRNP40Q96DI7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.67■■□□□ 1.06
SNRNP40Q96DI7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.67■■□□□ 1.06
SNRNP40Q96DI7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNRNP40Q96DI7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.66■■□□□ 1.06
SNRNP40Q96DI7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.66■■□□□ 1.06
SNRNP40Q96DI7 MIR4281-201ENST00000580852 62 ntBASIC21.66■■□□□ 1.06
SNRNP40Q96DI7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRNP40Q96DI7 AC139426.1-201ENST00000568218 2529 ntBASIC21.66■■□□□ 1.06
SNRNP40Q96DI7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRNP40Q96DI7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNRNP40Q96DI7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP40Q96DI7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.65■■□□□ 1.06
SNRNP40Q96DI7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP40Q96DI7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP40Q96DI7 AC010997.5-201ENST00000609182 354 ntBASIC21.65■■□□□ 1.06
SNRNP40Q96DI7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP40Q96DI7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP40Q96DI7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP40Q96DI7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.64■■□□□ 1.06
SNRNP40Q96DI7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNRNP40Q96DI7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SNRNP40Q96DI7 DRD5P2-201ENST00000421395 2012 ntBASIC21.64■■□□□ 1.05
SNRNP40Q96DI7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SNRNP40Q96DI7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.64■■□□□ 1.05
SNRNP40Q96DI7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.64■■□□□ 1.05
SNRNP40Q96DI7 AL117332.1-201ENST00000622628 974 ntBASIC21.64■■□□□ 1.05
SNRNP40Q96DI7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SNRNP40Q96DI7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SNRNP40Q96DI7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNRNP40Q96DI7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNRNP40Q96DI7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNRNP40Q96DI7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SNRNP40Q96DI7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SNRNP40Q96DI7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.63■■□□□ 1.05
SNRNP40Q96DI7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.63■■□□□ 1.05
SNRNP40Q96DI7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNRNP40Q96DI7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNRNP40Q96DI7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 LINC01003-201ENST00000564834 1764 ntBASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.62■■□□□ 1.05
SNRNP40Q96DI7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 MIR3621-201ENST00000580529 85 ntBASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 MIR6724-1-201ENST00000616420 92 ntBASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 MIR6724-2-201ENST00000616483 92 ntBASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 MIR6724-4-201ENST00000617390 92 ntBASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 MIR6724-3-201ENST00000622482 92 ntBASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SNRNP40Q96DI7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNRNP40Q96DI7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNRNP40Q96DI7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNRNP40Q96DI7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNRNP40Q96DI7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms