Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.18■■□□□ 1.62
SHKBP1Q8TBC3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.18■■□□□ 1.62
SHKBP1Q8TBC3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SHKBP1Q8TBC3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHKBP1Q8TBC3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHKBP1Q8TBC3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SHKBP1Q8TBC3 AP004609.3-201ENST00000610705 1884 ntBASIC25.17■■□□□ 1.62
SHKBP1Q8TBC3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHKBP1Q8TBC3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SHKBP1Q8TBC3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
SHKBP1Q8TBC3 AC239859.2-201ENST00000444165 318 ntBASIC25.16■■□□□ 1.62
SHKBP1Q8TBC3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.16■■□□□ 1.62
SHKBP1Q8TBC3 THA1P-201ENST00000590384 1145 ntBASIC25.16■■□□□ 1.62
SHKBP1Q8TBC3 AC131212.1-201ENST00000613771 668 ntBASIC25.16■■□□□ 1.62
SHKBP1Q8TBC3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.16■■□□□ 1.62
SHKBP1Q8TBC3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SHKBP1Q8TBC3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SHKBP1Q8TBC3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.15■■□□□ 1.62
SHKBP1Q8TBC3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHKBP1Q8TBC3 AL592295.1-201ENST00000400984 884 ntBASIC25.15■■□□□ 1.62
SHKBP1Q8TBC3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.15■■□□□ 1.62
SHKBP1Q8TBC3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHKBP1Q8TBC3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SHKBP1Q8TBC3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.14■■□□□ 1.62
SHKBP1Q8TBC3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SHKBP1Q8TBC3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.14■■□□□ 1.62
SHKBP1Q8TBC3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHKBP1Q8TBC3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHKBP1Q8TBC3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.13■■□□□ 1.61
SHKBP1Q8TBC3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.13■■□□□ 1.61
SHKBP1Q8TBC3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHKBP1Q8TBC3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHKBP1Q8TBC3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SHKBP1Q8TBC3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SHKBP1Q8TBC3 AL356441.2-201ENST00000443009 864 ntBASIC25.12■■□□□ 1.61
SHKBP1Q8TBC3 AC022616.5-201ENST00000518796 181 ntBASIC25.12■■□□□ 1.61
SHKBP1Q8TBC3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHKBP1Q8TBC3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHKBP1Q8TBC3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHKBP1Q8TBC3 Z92544.1-202ENST00000571933 1220 ntBASIC25.11■■□□□ 1.61
SHKBP1Q8TBC3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.11■■□□□ 1.61
SHKBP1Q8TBC3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHKBP1Q8TBC3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.1■■□□□ 1.61
SHKBP1Q8TBC3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHKBP1Q8TBC3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.1■■□□□ 1.61
SHKBP1Q8TBC3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHKBP1Q8TBC3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SHKBP1Q8TBC3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
SHKBP1Q8TBC3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.09■■□□□ 1.61
SHKBP1Q8TBC3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.09■■□□□ 1.61
SHKBP1Q8TBC3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.09■■□□□ 1.61
SHKBP1Q8TBC3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SHKBP1Q8TBC3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SHKBP1Q8TBC3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHKBP1Q8TBC3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SHKBP1Q8TBC3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SHKBP1Q8TBC3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.08■■□□□ 1.6
SHKBP1Q8TBC3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHKBP1Q8TBC3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHKBP1Q8TBC3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.07■■□□□ 1.6
SHKBP1Q8TBC3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHKBP1Q8TBC3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
SHKBP1Q8TBC3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHKBP1Q8TBC3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHKBP1Q8TBC3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SHKBP1Q8TBC3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SHKBP1Q8TBC3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHKBP1Q8TBC3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.06■■□□□ 1.6
SHKBP1Q8TBC3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
SHKBP1Q8TBC3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SHKBP1Q8TBC3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SHKBP1Q8TBC3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SHKBP1Q8TBC3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
SHKBP1Q8TBC3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHKBP1Q8TBC3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHKBP1Q8TBC3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SHKBP1Q8TBC3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHKBP1Q8TBC3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHKBP1Q8TBC3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SHKBP1Q8TBC3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.05■■□□□ 1.6
SHKBP1Q8TBC3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.05■■□□□ 1.6
SHKBP1Q8TBC3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
SHKBP1Q8TBC3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.05■■□□□ 1.6
SHKBP1Q8TBC3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHKBP1Q8TBC3 KRT18P24-201ENST00000344739 1156 ntBASIC25.04■■□□□ 1.6
SHKBP1Q8TBC3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHKBP1Q8TBC3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.04■■□□□ 1.6
SHKBP1Q8TBC3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.04■■□□□ 1.6
SHKBP1Q8TBC3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SHKBP1Q8TBC3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.03■■□□□ 1.6
SHKBP1Q8TBC3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHKBP1Q8TBC3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
SHKBP1Q8TBC3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHKBP1Q8TBC3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHKBP1Q8TBC3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHKBP1Q8TBC3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SHKBP1Q8TBC3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SHKBP1Q8TBC3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
SHKBP1Q8TBC3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.02■■□□□ 1.6
SHKBP1Q8TBC3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms