Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01561Q8N1V8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 LINC00543-201ENST00000567234 1845 ntBASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01561Q8N1V8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01561Q8N1V8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01561Q8N1V8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LINC01561Q8N1V8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01561Q8N1V8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC01561Q8N1V8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01561Q8N1V8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01561Q8N1V8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LINC01561Q8N1V8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LINC01561Q8N1V8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 MED25-210ENST00000612854 801 ntTSL 5 BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 MED25-214ENST00000622402 642 ntTSL 5 BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01561Q8N1V8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC01561Q8N1V8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 SLC6A10P-202ENST00000431994 2058 ntBASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 LINC01124-201ENST00000409786 2117 ntBASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01561Q8N1V8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01561Q8N1V8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01561Q8N1V8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC15.94■□□□□ 0.14
LINC01561Q8N1V8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01561Q8N1V8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LINC01561Q8N1V8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LINC01561Q8N1V8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01561Q8N1V8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01561Q8N1V8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01561Q8N1V8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LINC01561Q8N1V8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01561Q8N1V8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01561Q8N1V8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01561Q8N1V8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01561Q8N1V8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LINC01561Q8N1V8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.93■□□□□ 0.14
LINC01561Q8N1V8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.93■□□□□ 0.14
LINC01561Q8N1V8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01561Q8N1V8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01561Q8N1V8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LINC01561Q8N1V8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01561Q8N1V8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC15.92■□□□□ 0.14
LINC01561Q8N1V8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01561Q8N1V8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LINC01561Q8N1V8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01561Q8N1V8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01561Q8N1V8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01561Q8N1V8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LINC01561Q8N1V8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01561Q8N1V8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01561Q8N1V8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
LINC01561Q8N1V8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC01561Q8N1V8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LINC01561Q8N1V8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC01561Q8N1V8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01561Q8N1V8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01561Q8N1V8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC01561Q8N1V8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01561Q8N1V8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01561Q8N1V8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINC01561Q8N1V8 MIR6089-201ENST00000616698 64 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms