Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL27A1Q8IZC6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL27A1Q8IZC6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
COL27A1Q8IZC6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
COL27A1Q8IZC6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.97■■□□□ 1.27
COL27A1Q8IZC6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.97■■□□□ 1.27
COL27A1Q8IZC6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL27A1Q8IZC6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL27A1Q8IZC6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.96■■□□□ 1.27
COL27A1Q8IZC6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.96■■□□□ 1.27
COL27A1Q8IZC6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL27A1Q8IZC6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL27A1Q8IZC6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
COL27A1Q8IZC6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
COL27A1Q8IZC6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.96■■□□□ 1.27
COL27A1Q8IZC6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.96■■□□□ 1.27
COL27A1Q8IZC6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.95■■□□□ 1.27
COL27A1Q8IZC6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL27A1Q8IZC6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.95■■□□□ 1.26
COL27A1Q8IZC6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.95■■□□□ 1.26
COL27A1Q8IZC6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL27A1Q8IZC6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL27A1Q8IZC6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.94■■□□□ 1.26
COL27A1Q8IZC6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.94■■□□□ 1.26
COL27A1Q8IZC6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.94■■□□□ 1.26
COL27A1Q8IZC6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL27A1Q8IZC6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL27A1Q8IZC6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.94■■□□□ 1.26
COL27A1Q8IZC6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.94■■□□□ 1.26
COL27A1Q8IZC6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL27A1Q8IZC6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL27A1Q8IZC6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL27A1Q8IZC6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
COL27A1Q8IZC6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL27A1Q8IZC6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.93■■□□□ 1.26
COL27A1Q8IZC6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 AC092028.1-203ENST00000608262 953 ntBASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 AC139426.1-201ENST00000568218 2529 ntBASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 AL117332.1-201ENST00000622628 974 ntBASIC22.92■■□□□ 1.26
COL27A1Q8IZC6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.91■■□□□ 1.26
COL27A1Q8IZC6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL27A1Q8IZC6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
COL27A1Q8IZC6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL27A1Q8IZC6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.91■■□□□ 1.26
COL27A1Q8IZC6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
COL27A1Q8IZC6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.9■■□□□ 1.26
COL27A1Q8IZC6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.9■■□□□ 1.26
COL27A1Q8IZC6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
COL27A1Q8IZC6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.9■■□□□ 1.26
COL27A1Q8IZC6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL27A1Q8IZC6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL27A1Q8IZC6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL27A1Q8IZC6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL27A1Q8IZC6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL27A1Q8IZC6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
COL27A1Q8IZC6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL27A1Q8IZC6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL27A1Q8IZC6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 TSPY9P-201ENST00000440215 945 ntBASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 TSPY11P-201ENST00000442607 1045 ntBASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 AL512631.2-201ENST00000604634 923 ntBASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 AC011551.1-201ENST00000614101 683 ntBASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 AC110285.6-201ENST00000617652 491 ntBASIC22.88■■□□□ 1.25
COL27A1Q8IZC6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL27A1Q8IZC6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.87■■□□□ 1.25
COL27A1Q8IZC6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.87■■□□□ 1.25
COL27A1Q8IZC6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL27A1Q8IZC6 MIR935-201ENST00000401179 91 ntBASIC22.87■■□□□ 1.25
COL27A1Q8IZC6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL27A1Q8IZC6 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.87■■□□□ 1.25
COL27A1Q8IZC6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL27A1Q8IZC6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL27A1Q8IZC6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.86■■□□□ 1.25
COL27A1Q8IZC6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL27A1Q8IZC6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL27A1Q8IZC6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL27A1Q8IZC6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL27A1Q8IZC6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.85■■□□□ 1.25
COL27A1Q8IZC6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.85■■□□□ 1.25
COL27A1Q8IZC6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.85■■□□□ 1.25
COL27A1Q8IZC6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.85■■□□□ 1.25
COL27A1Q8IZC6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.85■■□□□ 1.25
COL27A1Q8IZC6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.85■■□□□ 1.25
COL27A1Q8IZC6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL27A1Q8IZC6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL27A1Q8IZC6 MIR4466-201ENST00000606121 54 ntBASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms