Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM42Q8IWZ5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TRIM42Q8IWZ5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM42Q8IWZ5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM42Q8IWZ5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TRIM42Q8IWZ5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM42Q8IWZ5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TRIM42Q8IWZ5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM42Q8IWZ5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM42Q8IWZ5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.64■■□□□ 1.38
TRIM42Q8IWZ5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM42Q8IWZ5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
TRIM42Q8IWZ5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM42Q8IWZ5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM42Q8IWZ5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM42Q8IWZ5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM42Q8IWZ5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIM42Q8IWZ5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM42Q8IWZ5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM42Q8IWZ5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM42Q8IWZ5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
TRIM42Q8IWZ5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM42Q8IWZ5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM42Q8IWZ5 LINC00543-201ENST00000567234 1845 ntBASIC23.62■■□□□ 1.37
TRIM42Q8IWZ5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TRIM42Q8IWZ5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.62■■□□□ 1.37
TRIM42Q8IWZ5 AC097639.1-201ENST00000565519 1891 ntBASIC23.62■■□□□ 1.37
TRIM42Q8IWZ5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM42Q8IWZ5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
TRIM42Q8IWZ5 AC141586.4-201ENST00000624558 1573 ntBASIC23.61■■□□□ 1.37
TRIM42Q8IWZ5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM42Q8IWZ5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM42Q8IWZ5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM42Q8IWZ5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM42Q8IWZ5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.61■■□□□ 1.37
TRIM42Q8IWZ5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.61■■□□□ 1.37
TRIM42Q8IWZ5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TRIM42Q8IWZ5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM42Q8IWZ5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM42Q8IWZ5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM42Q8IWZ5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM42Q8IWZ5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM42Q8IWZ5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM42Q8IWZ5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM42Q8IWZ5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TRIM42Q8IWZ5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM42Q8IWZ5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM42Q8IWZ5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
TRIM42Q8IWZ5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM42Q8IWZ5 AC008813.1-201ENST00000536597 885 ntBASIC23.58■■□□□ 1.37
TRIM42Q8IWZ5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM42Q8IWZ5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM42Q8IWZ5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM42Q8IWZ5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM42Q8IWZ5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM42Q8IWZ5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM42Q8IWZ5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
TRIM42Q8IWZ5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM42Q8IWZ5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.57■■□□□ 1.36
TRIM42Q8IWZ5 AL359504.2-201ENST00000605506 1601 ntBASIC23.56■■□□□ 1.36
TRIM42Q8IWZ5 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM42Q8IWZ5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM42Q8IWZ5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TRIM42Q8IWZ5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM42Q8IWZ5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TRIM42Q8IWZ5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.55■■□□□ 1.36
TRIM42Q8IWZ5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM42Q8IWZ5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.55■■□□□ 1.36
TRIM42Q8IWZ5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM42Q8IWZ5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM42Q8IWZ5 MIR219A2-201ENST00000608502 1504 ntBASIC23.54■■□□□ 1.36
TRIM42Q8IWZ5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
TRIM42Q8IWZ5 AC148477.6-201ENST00000623746 465 ntBASIC23.54■■□□□ 1.36
TRIM42Q8IWZ5 SLC6A10P-202ENST00000431994 2058 ntBASIC23.54■■□□□ 1.36
TRIM42Q8IWZ5 AC133561.1-201ENST00000568600 2415 ntBASIC23.54■■□□□ 1.36
TRIM42Q8IWZ5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
TRIM42Q8IWZ5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM42Q8IWZ5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM42Q8IWZ5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM42Q8IWZ5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM42Q8IWZ5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM42Q8IWZ5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM42Q8IWZ5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM42Q8IWZ5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM42Q8IWZ5 AL359258.2-201ENST00000564063 1566 ntBASIC23.52■■□□□ 1.36
TRIM42Q8IWZ5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM42Q8IWZ5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM42Q8IWZ5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.52■■□□□ 1.36
TRIM42Q8IWZ5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM42Q8IWZ5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
TRIM42Q8IWZ5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM42Q8IWZ5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM42Q8IWZ5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM42Q8IWZ5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.52■■□□□ 1.35
TRIM42Q8IWZ5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM42Q8IWZ5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM42Q8IWZ5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM42Q8IWZ5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM42Q8IWZ5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM42Q8IWZ5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms