Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 AP002365.1-201ENST00000603448 772 ntBASIC20.87■□□□□ 0.93
CCDC190Q86UF4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC190Q86UF4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC190Q86UF4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC190Q86UF4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCDC190Q86UF4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC190Q86UF4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC190Q86UF4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC190Q86UF4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC190Q86UF4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC190Q86UF4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC190Q86UF4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC190Q86UF4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
CCDC190Q86UF4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC190Q86UF4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC190Q86UF4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC190Q86UF4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC190Q86UF4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC190Q86UF4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC190Q86UF4 LINC00273-201ENST00000539813 1452 ntBASIC20.84■□□□□ 0.93
CCDC190Q86UF4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC190Q86UF4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC190Q86UF4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CCDC190Q86UF4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC190Q86UF4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
CCDC190Q86UF4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC190Q86UF4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC190Q86UF4 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.83■□□□□ 0.93
CCDC190Q86UF4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC190Q86UF4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC190Q86UF4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC190Q86UF4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC190Q86UF4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC190Q86UF4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC190Q86UF4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC190Q86UF4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC190Q86UF4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC190Q86UF4 AC004812.2-201ENST00000611079 2094 ntBASIC20.81■□□□□ 0.92
CCDC190Q86UF4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC190Q86UF4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC190Q86UF4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC190Q86UF4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC190Q86UF4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC190Q86UF4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC190Q86UF4 LINC00565-201ENST00000562710 2331 ntBASIC20.8■□□□□ 0.92
CCDC190Q86UF4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC190Q86UF4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC190Q86UF4 ABCB10P4-201ENST00000566803 2184 ntBASIC20.8■□□□□ 0.92
CCDC190Q86UF4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC190Q86UF4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC190Q86UF4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC190Q86UF4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC190Q86UF4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC190Q86UF4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC190Q86UF4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC190Q86UF4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC190Q86UF4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC190Q86UF4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC190Q86UF4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC190Q86UF4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC190Q86UF4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC190Q86UF4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC190Q86UF4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC190Q86UF4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC190Q86UF4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC190Q86UF4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC190Q86UF4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC190Q86UF4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC190Q86UF4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC190Q86UF4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC190Q86UF4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCDC190Q86UF4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC190Q86UF4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC190Q86UF4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC190Q86UF4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC190Q86UF4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC190Q86UF4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC190Q86UF4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC190Q86UF4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC190Q86UF4 SLC6A10P-202ENST00000431994 2058 ntBASIC20.76■□□□□ 0.91
CCDC190Q86UF4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC190Q86UF4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC190Q86UF4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC190Q86UF4 EP400NL-214ENST00000641289 2402 ntBASIC20.75■□□□□ 0.91
CCDC190Q86UF4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC190Q86UF4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC190Q86UF4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC190Q86UF4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC190Q86UF4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC190Q86UF4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC190Q86UF4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC190Q86UF4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC190Q86UF4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC190Q86UF4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC190Q86UF4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC190Q86UF4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC190Q86UF4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC190Q86UF4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC190Q86UF4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC190Q86UF4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms