Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
FAM78BQ5VT40 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
FAM78BQ5VT40 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM78BQ5VT40 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM78BQ5VT40 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.76■□□□□ 0.59
FAM78BQ5VT40 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FAM78BQ5VT40 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.75■□□□□ 0.59
FAM78BQ5VT40 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.75■□□□□ 0.59
FAM78BQ5VT40 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
FAM78BQ5VT40 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FAM78BQ5VT40 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM78BQ5VT40 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 LINC00543-201ENST00000567234 1845 ntBASIC18.73■□□□□ 0.59
FAM78BQ5VT40 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM78BQ5VT40 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM78BQ5VT40 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
FAM78BQ5VT40 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.72■□□□□ 0.59
FAM78BQ5VT40 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.72■□□□□ 0.59
FAM78BQ5VT40 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM78BQ5VT40 AC079834.2-201ENST00000609776 1949 ntBASIC18.72■□□□□ 0.59
FAM78BQ5VT40 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM78BQ5VT40 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM78BQ5VT40 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
FAM78BQ5VT40 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM78BQ5VT40 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM78BQ5VT40 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM78BQ5VT40 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.71■□□□□ 0.59
FAM78BQ5VT40 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.71■□□□□ 0.59
FAM78BQ5VT40 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM78BQ5VT40 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM78BQ5VT40 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.71■□□□□ 0.59
FAM78BQ5VT40 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
FAM78BQ5VT40 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FAM78BQ5VT40 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM78BQ5VT40 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM78BQ5VT40 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM78BQ5VT40 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.7■□□□□ 0.58
FAM78BQ5VT40 LINC01971-201ENST00000617888 1048 ntBASIC18.7■□□□□ 0.58
FAM78BQ5VT40 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM78BQ5VT40 AC068473.5-201ENST00000616428 2072 ntBASIC18.7■□□□□ 0.58
FAM78BQ5VT40 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
FAM78BQ5VT40 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 LINC01124-201ENST00000409786 2117 ntBASIC18.69■□□□□ 0.58
FAM78BQ5VT40 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM78BQ5VT40 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM78BQ5VT40 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM78BQ5VT40 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.68■□□□□ 0.58
FAM78BQ5VT40 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM78BQ5VT40 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM78BQ5VT40 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM78BQ5VT40 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM78BQ5VT40 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM78BQ5VT40 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM78BQ5VT40 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM78BQ5VT40 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM78BQ5VT40 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM78BQ5VT40 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms