Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FREM1Q5H8C1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FREM1Q5H8C1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FREM1Q5H8C1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.14■□□□□ 0.97
FREM1Q5H8C1 AL451085.2-201ENST00000605085 799 ntBASIC21.14■□□□□ 0.97
FREM1Q5H8C1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.14■□□□□ 0.97
FREM1Q5H8C1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FREM1Q5H8C1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.14■□□□□ 0.97
FREM1Q5H8C1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.13■□□□□ 0.97
FREM1Q5H8C1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FREM1Q5H8C1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.12■□□□□ 0.97
FREM1Q5H8C1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FREM1Q5H8C1 KRT18P10-201ENST00000388836 1287 ntBASIC21.12■□□□□ 0.97
FREM1Q5H8C1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FREM1Q5H8C1 AC074183.2-201ENST00000623112 922 ntBASIC21.12■□□□□ 0.97
FREM1Q5H8C1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 AC018755.3-202ENST00000596210 929 ntBASIC21.11■□□□□ 0.97
FREM1Q5H8C1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.11■□□□□ 0.97
FREM1Q5H8C1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.1■□□□□ 0.97
FREM1Q5H8C1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FREM1Q5H8C1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FREM1Q5H8C1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FREM1Q5H8C1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
FREM1Q5H8C1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FREM1Q5H8C1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FREM1Q5H8C1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.1■□□□□ 0.97
FREM1Q5H8C1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FREM1Q5H8C1 BHLHE23-202ENST00000612929 1109 ntBASIC21.09■□□□□ 0.97
FREM1Q5H8C1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
FREM1Q5H8C1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.09■□□□□ 0.97
FREM1Q5H8C1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FREM1Q5H8C1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.08■□□□□ 0.97
FREM1Q5H8C1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FREM1Q5H8C1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.08■□□□□ 0.97
FREM1Q5H8C1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FREM1Q5H8C1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FREM1Q5H8C1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FREM1Q5H8C1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FREM1Q5H8C1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FREM1Q5H8C1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FREM1Q5H8C1 KRT8P33-201ENST00000508125 1423 ntBASIC21.07■□□□□ 0.96
FREM1Q5H8C1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FREM1Q5H8C1 AC097639.1-201ENST00000565519 1891 ntBASIC21.07■□□□□ 0.96
FREM1Q5H8C1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
FREM1Q5H8C1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.07■□□□□ 0.96
FREM1Q5H8C1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.07■□□□□ 0.96
FREM1Q5H8C1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 AC009299.2-201ENST00000482477 511 ntBASIC21.06■□□□□ 0.96
FREM1Q5H8C1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FREM1Q5H8C1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.05■□□□□ 0.96
FREM1Q5H8C1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FREM1Q5H8C1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FREM1Q5H8C1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FREM1Q5H8C1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FREM1Q5H8C1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FREM1Q5H8C1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.04■□□□□ 0.96
FREM1Q5H8C1 AC022616.5-201ENST00000518796 181 ntBASIC21.04■□□□□ 0.96
FREM1Q5H8C1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.04■□□□□ 0.96
FREM1Q5H8C1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FREM1Q5H8C1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
FREM1Q5H8C1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
FREM1Q5H8C1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FREM1Q5H8C1 AC103834.1-201ENST00000520383 144 ntBASIC21.03■□□□□ 0.96
FREM1Q5H8C1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.03■□□□□ 0.96
FREM1Q5H8C1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.03■□□□□ 0.96
FREM1Q5H8C1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
FREM1Q5H8C1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FREM1Q5H8C1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.03■□□□□ 0.96
FREM1Q5H8C1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FREM1Q5H8C1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms