Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC6.34□□□□□ -1.391e-7■■■■□ 24.6
EWSR1Q01844 DDX3X-211ENST00000615742 485 ntTSL 46.34□□□□□ -1.391e-7■■■■□ 24.6
EWSR1Q01844 DDX3X-207ENST00000610559 542 ntTSL 45.89□□□□□ -1.471e-7■■■■□ 24.6
EWSR1Q01844 DDX3X-205ENST00000480592 1001 ntTSL 1 (best)5.71□□□□□ -1.51e-7■■■■□ 24.6
EWSR1Q01844 ZC3H3-202ENST00000528401 546 ntTSL 313.17□□□□□ -0.31e-6■■■■□ 24.6
EWSR1Q01844 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.48□□□□□ -0.411e-6■■■■□ 24.6
EWSR1Q01844 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.541e-6■■■■□ 24.6
EWSR1Q01844 PPARGC1B-206ENST00000461780 566 ntTSL 411.41□□□□□ -0.581e-6■■■■□ 24.6
EWSR1Q01844 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.251e-6■■■■□ 24.6
EWSR1Q01844 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.161e-6■■■■□ 24.6
EWSR1Q01844 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.88■■□□□ 1.091e-6■■■■□ 24.6
EWSR1Q01844 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.86■□□□□ 0.931e-6■■■■□ 24.6
EWSR1Q01844 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.882e-6■■■■□ 24.6
EWSR1Q01844 TGFBR1-207ENST00000549766 1678 ntTSL 520.04■□□□□ 0.82e-8■■■■□ 24.6
EWSR1Q01844 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.82■□□□□ 0.761e-6■■■■□ 24.6
EWSR1Q01844 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.582e-8■■■■□ 24.6
EWSR1Q01844 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.05■□□□□ 0.322e-8■■■■□ 24.6
EWSR1Q01844 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.99■□□□□ 0.311e-6■■■■□ 24.6
EWSR1Q01844 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.241e-6■■■■□ 24.6
EWSR1Q01844 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.39■□□□□ 0.211e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-205ENST00000444184 1887 ntTSL 1 (best)16.19■□□□□ 0.181e-6■■■■□ 24.6
EWSR1Q01844 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.11■□□□□ 0.171e-6■■■■□ 24.6
EWSR1Q01844 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.131e-6■■■■□ 24.6
EWSR1Q01844 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.86■□□□□ 0.131e-6■■■■□ 24.6
EWSR1Q01844 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.121e-6■■■■□ 24.6
EWSR1Q01844 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.36■□□□□ 0.051e-6■■■■□ 24.6
EWSR1Q01844 NUDT14-205ENST00000550912 541 ntTSL 315.21■□□□□ 0.031e-6■■■■□ 24.6
EWSR1Q01844 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.11■□□□□ 0.011e-6■■■■□ 24.6
EWSR1Q01844 PDPK1-215ENST00000566659 451 ntTSL 315.02■□□□□ -01e-6■■■■□ 24.6
EWSR1Q01844 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.01□□□□□ -0.011e-6■■■■□ 24.6
EWSR1Q01844 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.011e-6■■■■□ 24.6
EWSR1Q01844 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.041e-6■■■■□ 24.6
EWSR1Q01844 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.092e-6■■■■□ 24.6
EWSR1Q01844 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.11e-6■■■■□ 24.6
EWSR1Q01844 PTPA-226ENST00000455292 949 ntTSL 514.31□□□□□ -0.121e-6■■■■□ 24.6
EWSR1Q01844 PDPK1-212ENST00000491073 2387 ntTSL 1 (best)14.18□□□□□ -0.141e-6■■■■□ 24.6
EWSR1Q01844 FADS3-202ENST00000414624 1452 ntTSL 213.82□□□□□ -0.21e-6■■■■□ 24.6
EWSR1Q01844 NAXD-203ENST00000470164 2377 ntTSL 213.66□□□□□ -0.221e-6■■■■□ 24.6
EWSR1Q01844 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.57□□□□□ -0.241e-6■■■■□ 24.6
EWSR1Q01844 SCNN1D-204ENST00000379101 2268 ntTSL 1 (best)13.48□□□□□ -0.251e-6■■■■□ 24.6
EWSR1Q01844 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.3□□□□□ -0.281e-6■■■■□ 24.6
EWSR1Q01844 FADS3-205ENST00000526294 550 ntTSL 313.21□□□□□ -0.291e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.09□□□□□ -0.311e-6■■■■□ 24.6
EWSR1Q01844 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.08□□□□□ -0.311e-6■■■■□ 24.6
EWSR1Q01844 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.331e-6■■■■□ 24.6
EWSR1Q01844 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.332e-6■■■■□ 24.6
EWSR1Q01844 FADS3-208ENST00000529404 2379 ntTSL 212.92□□□□□ -0.341e-6■■■■□ 24.6
EWSR1Q01844 PTPRVP-203ENST00000638692 1189 ntTSL 1 (best)12.84□□□□□ -0.351e-6■■■■□ 24.6
EWSR1Q01844 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.371e-6■■■■□ 24.6
EWSR1Q01844 FADS3-211ENST00000533676 5314 ntTSL 212.65□□□□□ -0.381e-6■■■■□ 24.6
EWSR1Q01844 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.413e-6■■■■□ 24.6
EWSR1Q01844 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.421e-6■■■■□ 24.6
EWSR1Q01844 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.421e-6■■■■□ 24.6
EWSR1Q01844 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.37□□□□□ -0.431e-6■■■■□ 24.6
EWSR1Q01844 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.432e-6■■■■□ 24.6
EWSR1Q01844 MIER2-203ENST00000587966 462 ntTSL 512.32□□□□□ -0.441e-6■■■■□ 24.6
EWSR1Q01844 KDM6B-203ENST00000570632 1339 ntTSL 512.13□□□□□ -0.471e-6■■■■□ 24.6
EWSR1Q01844 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.541e-6■■■■□ 24.6
EWSR1Q01844 PTPRVP-205ENST00000641549 5067 ntBASIC11.65□□□□□ -0.541e-6■■■■□ 24.6
EWSR1Q01844 PDPK1-206ENST00000461815 611 ntTSL 311.62□□□□□ -0.551e-6■■■■□ 24.6
EWSR1Q01844 TSKU-204ENST00000533752 643 ntTSL 411.61□□□□□ -0.552e-6■■■■□ 24.6
EWSR1Q01844 PTPA-209ENST00000414331 681 ntTSL 311.6□□□□□ -0.551e-6■■■■□ 24.6
EWSR1Q01844 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.49□□□□□ -0.571e-6■■■■□ 24.6
EWSR1Q01844 FADS3-210ENST00000531956 841 ntTSL 511.38□□□□□ -0.591e-6■■■■□ 24.6
EWSR1Q01844 FADS3-206ENST00000527379 768 ntTSL 311.22□□□□□ -0.611e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.04□□□□□ -0.641e-6■■■■□ 24.6
EWSR1Q01844 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.641e-6■■■■□ 24.6
EWSR1Q01844 PTPA-222ENST00000445241 949 ntTSL 310.88□□□□□ -0.671e-6■■■■□ 24.6
EWSR1Q01844 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.681e-6■■■■□ 24.6
EWSR1Q01844 DBNDD1-207ENST00000623401 2889 nt10.61□□□□□ -0.711e-6■■■■□ 24.6
EWSR1Q01844 MIER2-202ENST00000586994 1002 ntTSL 210.51□□□□□ -0.731e-6■■■■□ 24.6
EWSR1Q01844 GRB10-218ENST00000478162 599 ntTSL 410.25□□□□□ -0.771e-6■■■■□ 24.6
EWSR1Q01844 MIER2-207ENST00000635755 440 ntTSL 59.84□□□□□ -0.831e-6■■■■□ 24.6
EWSR1Q01844 FADS3-212ENST00000534223 800 ntTSL 59.77□□□□□ -0.851e-6■■■■□ 24.6
EWSR1Q01844 PTPA-224ENST00000453358 548 ntTSL 49.68□□□□□ -0.861e-6■■■■□ 24.6
EWSR1Q01844 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.863e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-210ENST00000608272 612 ntTSL 59.65□□□□□ -0.861e-6■■■■□ 24.6
EWSR1Q01844 POTEF-202ENST00000409914 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.881e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-216ENST00000623185 786 ntTSL 5 BASIC9.55□□□□□ -0.881e-6■■■■□ 24.6
EWSR1Q01844 GRB10-222ENST00000490051 578 ntTSL 49.53□□□□□ -0.881e-6■■■■□ 24.6
EWSR1Q01844 MROH1-204ENST00000527071 680 ntTSL 39.43□□□□□ -0.91e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-220ENST00000625171 830 ntTSL 59.4□□□□□ -0.91e-6■■■■□ 24.6
EWSR1Q01844 GRB10-220ENST00000483157 540 ntTSL 49.35□□□□□ -0.911e-6■■■■□ 24.6
EWSR1Q01844 ANP32B-202ENST00000473205 687 ntTSL 39.35□□□□□ -0.911e-6■■■■□ 24.6
EWSR1Q01844 TGFBR1-209ENST00000552516 5933 ntTSL 1 (best) BASIC9.2□□□□□ -0.942e-8■■■■□ 24.6
EWSR1Q01844 LINC00963-213ENST00000622120 355 ntTSL 59.14□□□□□ -0.951e-6■■■■□ 24.6
EWSR1Q01844 KNOP1-204ENST00000567367 595 ntAPPRIS ALT2 TSL 39.09□□□□□ -0.953e-6■■■■□ 24.6
EWSR1Q01844 GRB10-216ENST00000470992 544 ntTSL 49.08□□□□□ -0.961e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC9.03□□□□□ -0.961e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-211ENST00000608369 961 ntTSL 5 BASIC9□□□□□ -0.971e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC8.86□□□□□ -0.991e-6■■■■□ 24.6
EWSR1Q01844 SCNN1D-207ENST00000467651 204 ntTSL 58.56□□□□□ -1.041e-6■■■■□ 24.6
EWSR1Q01844 SCNN1D-208ENST00000470022 645 ntTSL 38.56□□□□□ -1.041e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-214ENST00000622680 781 ntTSL 1 (best)8.22□□□□□ -1.091e-6■■■■□ 24.6
EWSR1Q01844 PTPRVP-201ENST00000482597 3999 ntTSL 1 (best) BASIC8.11□□□□□ -1.111e-6■■■■□ 24.6
EWSR1Q01844 PTPA-212ENST00000417728 967 ntTSL 37.81□□□□□ -1.161e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-207ENST00000454635 910 ntTSL 5 BASIC7.7□□□□□ -1.181e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-209ENST00000607931 473 ntTSL 56.21□□□□□ -1.421e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-219ENST00000624390 472 ntTSL 56.17□□□□□ -1.421e-6■■■■□ 24.6
EWSR1Q01844 LINC00963-218ENST00000624138 261 ntTSL 55.48□□□□□ -1.531e-6■■■■□ 24.6
Retrieved 100 of 7,101 protein–RNA pairs in 358.9 ms