RNA–Protein interactions for RNA: ENST00000357197.8

PTPA-205, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 2,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-205ENST00000357197 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
PTPA-205ENST00000357197 CCDC180Q9P1Z9 1646 aa25.72■■□□□ 1.71
PTPA-205ENST00000357197 ABCC9O60706 1549 aa25.54■■□□□ 1.68
PTPA-205ENST00000357197 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
PTPA-205ENST00000357197 ZCCHC6Q5VYS8 1495 aaKnown RBP24.43■■□□□ 1.5
PTPA-205ENST00000357197 RB1CC1Q8TDY2 1594 aa24.24■■□□□ 1.47
PTPA-205ENST00000357197 NACADO15069 1562 aa24.19■■□□□ 1.46
PTPA-205ENST00000357197 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
PTPA-205ENST00000357197 HRCP23327 699 aa24.05■■□□□ 1.44
PTPA-205ENST00000357197 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
PTPA-205ENST00000357197 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
PTPA-205ENST00000357197 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
PTPA-205ENST00000357197 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
PTPA-205ENST00000357197 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
PTPA-205ENST00000357197 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
PTPA-205ENST00000357197 PPARGC1BQ86YN6 1023 aaKnown RBP23.6■■□□□ 1.37
PTPA-205ENST00000357197 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
PTPA-205ENST00000357197 DNAJC5BQ9UF47 199 aa23.44■■□□□ 1.34
PTPA-205ENST00000357197 PELP1Q8IZL8 1130 aaKnown RBP23.39■■□□□ 1.34
PTPA-205ENST00000357197 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
PTPA-205ENST00000357197 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
PTPA-205ENST00000357197 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
PTPA-205ENST00000357197 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
PTPA-205ENST00000357197 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
PTPA-205ENST00000357197 SCAF1Q9H7N4 1312 aaKnown RBP22.9■■□□□ 1.26
PTPA-205ENST00000357197 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
PTPA-205ENST00000357197 SMARCA4P51532 1647 aa22.72■■□□□ 1.23
PTPA-205ENST00000357197 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
PTPA-205ENST00000357197 TRIM26Q12899 539 aaPredicted RBP22.62■■□□□ 1.21
PTPA-205ENST00000357197 WIZO95785 1651 aa22.59■■□□□ 1.21
PTPA-205ENST00000357197 LOC105371045A0A1W2PR82 267 aa22.58■■□□□ 1.21
PTPA-205ENST00000357197 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
PTPA-205ENST00000357197 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
PTPA-205ENST00000357197 MYT1Q01538 1121 aa22.5■■□□□ 1.19
PTPA-205ENST00000357197 ZEB1P37275 1124 aaPredicted RBP22.45■■□□□ 1.18
PTPA-205ENST00000357197 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
PTPA-205ENST00000357197 NCAPD3P42695 1498 aa22.4■■□□□ 1.18
PTPA-205ENST00000357197 SMARCA2P51531 1590 aa22.39■■□□□ 1.17
PTPA-205ENST00000357197 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
PTPA-205ENST00000357197 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
PTPA-205ENST00000357197 ACIN1Q9UKV3 1341 aaKnown RBP22.23■■□□□ 1.15
PTPA-205ENST00000357197 NESP48681 1621 aa22.2■■□□□ 1.14
PTPA-205ENST00000357197 NEUROD1Q13562 356 aa22.19■■□□□ 1.14
PTPA-205ENST00000357197 TOP2AP11388 1531 aaKnown RBP22.1■■□□□ 1.13
PTPA-205ENST00000357197 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
PTPA-205ENST00000357197 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
PTPA-205ENST00000357197 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
PTPA-205ENST00000357197 ERCC6Q03468 1493 aa21.86■■□□□ 1.09
PTPA-205ENST00000357197 CENPBP07199 599 aaPredicted RBP21.85■■□□□ 1.09
PTPA-205ENST00000357197 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
PTPA-205ENST00000357197 DIEXFQ68CQ4 756 aaKnown RBP21.74■■□□□ 1.07
PTPA-205ENST00000357197 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
PTPA-205ENST00000357197 CFTRP13569 1480 aa21.74■■□□□ 1.07
PTPA-205ENST00000357197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
PTPA-205ENST00000357197 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
PTPA-205ENST00000357197 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
PTPA-205ENST00000357197 CCER1Q8TC90 406 aaPredicted RBP21.61■■□□□ 1.05
PTPA-205ENST00000357197 FAM9AQ8IZU1 332 aaPredicted RBP21.6■■□□□ 1.05
PTPA-205ENST00000357197 CEP164Q9UPV0 1460 aa21.57■■□□□ 1.04
PTPA-205ENST00000357197 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
PTPA-205ENST00000357197 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
PTPA-205ENST00000357197 THOC2Q8NI27 1593 aaKnown RBP21.52■■□□□ 1.04
PTPA-205ENST00000357197 URB2Q14146 1524 aaKnown RBP21.49■■□□□ 1.03
PTPA-205ENST00000357197 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
PTPA-205ENST00000357197 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
PTPA-205ENST00000357197 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.02
PTPA-205ENST00000357197 YTHDC1Q96MU7 727 aaKnown RBP21.43■■□□□ 1.02
PTPA-205ENST00000357197 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
PTPA-205ENST00000357197 WDR62O43379 1518 aa21.33■■□□□ 1.01
PTPA-205ENST00000357197 CUX1P39880 1505 aa21.31■■□□□ 1
PTPA-205ENST00000357197 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
PTPA-205ENST00000357197 CUX2O14529 1486 aa21.26■□□□□ 0.99
PTPA-205ENST00000357197 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
PTPA-205ENST00000357197 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
PTPA-205ENST00000357197 ZNF608Q9ULD9 1512 aaPredicted RBP21.23■□□□□ 0.99
PTPA-205ENST00000357197 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.991e-6■■□□□ 12
PTPA-205ENST00000357197 DNMBPQ6XZF7 1577 aa21.22■□□□□ 0.99
PTPA-205ENST00000357197 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
PTPA-205ENST00000357197 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
PTPA-205ENST00000357197 MIER1Q8N108 512 aa21.2■□□□□ 0.98
PTPA-205ENST00000357197 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
PTPA-205ENST00000357197 BCL11AQ9H165 835 aa21.16■□□□□ 0.98
PTPA-205ENST00000357197 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.982e-7■■■■□ 20.4
PTPA-205ENST00000357197 SOGA1O94964 1423 aa21.14■□□□□ 0.97
PTPA-205ENST00000357197 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
PTPA-205ENST00000357197 TOP2BQ02880 1626 aa21.05■□□□□ 0.96
PTPA-205ENST00000357197 TARBP1Q13395 1621 aaKnown RBP21.05■□□□□ 0.96
PTPA-205ENST00000357197 ANP32EQ9BTT0 268 aa21.04■□□□□ 0.96
PTPA-205ENST00000357197 FBLN2P98095 1184 aa21.02■□□□□ 0.96
PTPA-205ENST00000357197 IFT140Q96RY7 1462 aa21.02■□□□□ 0.95
PTPA-205ENST00000357197 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
PTPA-205ENST00000357197 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
PTPA-205ENST00000357197 SUPT16HQ9Y5B9 1047 aaKnown RBP20.96■□□□□ 0.95
PTPA-205ENST00000357197 TSHZ2Q9NRE2 1034 aa20.93■□□□□ 0.94
PTPA-205ENST00000357197 RUSC2Q8N2Y8 1516 aa20.93■□□□□ 0.94
PTPA-205ENST00000357197 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
PTPA-205ENST00000357197 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
PTPA-205ENST00000357197 ABCA10Q8WWZ4 1543 aa20.85■□□□□ 0.93
PTPA-205ENST00000357197 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
PTPA-205ENST00000357197 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms