RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 NISCHQ9Y2I1 1504 aa34.48■■■■□ 3.11
PTPA-206ENST00000358994 HRCP23327 699 aa30.72■■■□□ 2.51
PTPA-206ENST00000358994 SHROOM4Q9ULL8 1493 aa30.4■■■□□ 2.46
PTPA-206ENST00000358994 SUPT5HO00267 1087 aaKnown RBP30.27■■■□□ 2.44
PTPA-206ENST00000358994 MYO15BQ96JP2 1530 aa30.1■■■□□ 2.41
PTPA-206ENST00000358994 PPARGC1BQ86YN6 1023 aaKnown RBP30.06■■■□□ 2.4
PTPA-206ENST00000358994 PCGF6Q9BYE7 350 aa30.06■■■□□ 2.4
PTPA-206ENST00000358994 CHIC1Q5VXU3 224 aa29.87■■■□□ 2.37
PTPA-206ENST00000358994 PELP1Q8IZL8 1130 aaKnown RBP29.53■■■□□ 2.32
PTPA-206ENST00000358994 DCAF1Q9Y4B6 1507 aa29.46■■■□□ 2.31
PTPA-206ENST00000358994 ZCCHC6Q5VYS8 1495 aaKnown RBP29.36■■■□□ 2.29
PTPA-206ENST00000358994 LOC105371045A0A1W2PR82 267 aa29.14■■■□□ 2.26
PTPA-206ENST00000358994 TRIM26Q12899 539 aaPredicted RBP29.14■■■□□ 2.25
PTPA-206ENST00000358994 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
PTPA-206ENST00000358994 SCAF1Q9H7N4 1312 aaKnown RBP29.04■■■□□ 2.24
PTPA-206ENST00000358994 ZEB1P37275 1124 aaPredicted RBP28.87■■■□□ 2.21
PTPA-206ENST00000358994 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
PTPA-206ENST00000358994 MYT1Q01538 1121 aa28.35■■■□□ 2.13
PTPA-206ENST00000358994 ABCC9O60706 1549 aa28.35■■■□□ 2.13
PTPA-206ENST00000358994 ACIN1Q9UKV3 1341 aaKnown RBP28.33■■■□□ 2.13
PTPA-206ENST00000358994 NEUROD1Q13562 356 aa28.26■■■□□ 2.11
PTPA-206ENST00000358994 GTF3C3Q9Y5Q9 886 aa28.08■■■□□ 2.09
PTPA-206ENST00000358994 TRIM41Q8WV44 630 aa28.02■■■□□ 2.08
PTPA-206ENST00000358994 FAM9AQ8IZU1 332 aaPredicted RBP27.97■■■□□ 2.07
PTPA-206ENST00000358994 CENPBP07199 599 aaPredicted RBP27.92■■■□□ 2.06
PTPA-206ENST00000358994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.88■■■□□ 2.05
PTPA-206ENST00000358994 DIEXFQ68CQ4 756 aaKnown RBP27.85■■■□□ 2.05
PTPA-206ENST00000358994 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
PTPA-206ENST00000358994 CCER1Q8TC90 406 aaPredicted RBP27.8■■■□□ 2.04
PTPA-206ENST00000358994 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
PTPA-206ENST00000358994 RB1CC1Q8TDY2 1594 aa27.65■■■□□ 2.02
PTPA-206ENST00000358994 ZNF316A6NFI3 1004 aaPredicted RBP27.34■■□□□ 1.97
PTPA-206ENST00000358994 YTHDC1Q96MU7 727 aaKnown RBP27.34■■□□□ 1.97
PTPA-206ENST00000358994 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
PTPA-206ENST00000358994 TTBK1Q5TCY1 1321 aaPredicted RBP27.17■■□□□ 1.94
PTPA-206ENST00000358994 MIER1Q8N108 512 aa27.16■■□□□ 1.94
PTPA-206ENST00000358994 WRNQ14191 1432 aaPredicted RBP eCLIP27.14■■□□□ 1.941e-6■■□□□ 12
PTPA-206ENST00000358994 CECR2Q9BXF3 1484 aa26.96■■□□□ 1.91
PTPA-206ENST00000358994 CEP162Q5TB80 1403 aa26.95■■□□□ 1.9
PTPA-206ENST00000358994 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
PTPA-206ENST00000358994 EIF4G1Q04637 1599 aaKnown RBP26.89■■□□□ 1.9
PTPA-206ENST00000358994 WIZO95785 1651 aa26.87■■□□□ 1.89
PTPA-206ENST00000358994 PABPN1Q86U42 306 aaKnown RBP eCLIP26.83■■□□□ 1.89
PTPA-206ENST00000358994 NACADO15069 1562 aa26.82■■□□□ 1.88
PTPA-206ENST00000358994 TNIKQ9UKE5 1360 aa26.78■■□□□ 1.88
PTPA-206ENST00000358994 SUPT16HQ9Y5B9 1047 aaKnown RBP26.76■■□□□ 1.87
PTPA-206ENST00000358994 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
PTPA-206ENST00000358994 CLSPNQ9HAW4 1339 aa26.71■■□□□ 1.87
PTPA-206ENST00000358994 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
PTPA-206ENST00000358994 BAZ1AQ9NRL2 1556 aaPredicted RBP26.68■■□□□ 1.86
PTPA-206ENST00000358994 ANP32EQ9BTT0 268 aa26.67■■□□□ 1.86
PTPA-206ENST00000358994 HNRNPUL2Q1KMD3 747 aaKnown RBP26.65■■□□□ 1.86
PTPA-206ENST00000358994 TSHZ2Q9NRE2 1034 aa26.65■■□□□ 1.86
PTPA-206ENST00000358994 SOGA1O94964 1423 aa26.64■■□□□ 1.85
PTPA-206ENST00000358994 BCL11AQ9H165 835 aa26.57■■□□□ 1.84
PTPA-206ENST00000358994 UBTFP17480 764 aaKnown RBP26.56■■□□□ 1.84
PTPA-206ENST00000358994 CSRNP3Q8WYN3 585 aa26.52■■□□□ 1.84
PTPA-206ENST00000358994 RUSC2Q8N2Y8 1516 aa26.49■■□□□ 1.83
PTPA-206ENST00000358994 EEA1Q15075 1411 aa26.47■■□□□ 1.83
PTPA-206ENST00000358994 GOLGA3Q08378 1498 aa26.43■■□□□ 1.82
PTPA-206ENST00000358994 UNC13AQ9UPW8 1703 aa26.35■■□□□ 1.81
PTPA-206ENST00000358994 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
PTPA-206ENST00000358994 SMARCA2P51531 1590 aa26.28■■□□□ 1.8
PTPA-206ENST00000358994 DHX57Q6P158 1386 aaKnown RBP26.22■■□□□ 1.79
PTPA-206ENST00000358994 CLIP1P30622 1438 aa26.21■■□□□ 1.79
PTPA-206ENST00000358994 VPS8Q8N3P4 1428 aa26.21■■□□□ 1.79
PTPA-206ENST00000358994 BICRAQ9NZM4 1560 aa26.2■■□□□ 1.78
PTPA-206ENST00000358994 CEP164Q9UPV0 1460 aa26.15■■□□□ 1.78
PTPA-206ENST00000358994 APLP2Q06481 763 aa26.13■■□□□ 1.77
PTPA-206ENST00000358994 BCANQ96GW7 911 aa26.13■■□□□ 1.77
PTPA-206ENST00000358994 KIF21BO75037 1637 aa26.11■■□□□ 1.77
PTPA-206ENST00000358994 KCNH8Q96L42 1107 aa26.11■■□□□ 1.77
PTPA-206ENST00000358994 SMARCA4P51532 1647 aa26.05■■□□□ 1.76
PTPA-206ENST00000358994 FKBP8Q14318 412 aa26.03■■□□□ 1.76
PTPA-206ENST00000358994 RBM19Q9Y4C8 960 aaKnown RBP26.01■■□□□ 1.75
PTPA-206ENST00000358994 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
PTPA-206ENST00000358994 DNAJC5BQ9UF47 199 aa25.93■■□□□ 1.74
PTPA-206ENST00000358994 RAPGEF2Q9Y4G8 1499 aa25.91■■□□□ 1.74
PTPA-206ENST00000358994 RANGAP1P46060 587 aaPredicted RBP25.9■■□□□ 1.74
PTPA-206ENST00000358994 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
PTPA-206ENST00000358994 MSH5O43196 834 aa25.8■■□□□ 1.72
PTPA-206ENST00000358994 KANK4Q5T7N3 995 aaPredicted RBP25.78■■□□□ 1.72
PTPA-206ENST00000358994 CUX2O14529 1486 aa25.77■■□□□ 1.72
PTPA-206ENST00000358994 NEFLP07196 543 aa25.77■■□□□ 1.72
PTPA-206ENST00000358994 ITGAEP38570 1179 aa25.76■■□□□ 1.71
PTPA-206ENST00000358994 RRBP1Q9P2E9 1410 aaKnown RBP25.76■■□□□ 1.71
PTPA-206ENST00000358994 DDX10Q13206 875 aaKnown RBP25.71■■□□□ 1.71
PTPA-206ENST00000358994 ARAP1Q96P48 1450 aa25.68■■□□□ 1.7
PTPA-206ENST00000358994 MAPKBP1O60336 1514 aa25.64■■□□□ 1.7
PTPA-206ENST00000358994 TRIM52Q96A61 297 aa25.63■■□□□ 1.69
PTPA-206ENST00000358994 CCNB3Q8WWL7 1395 aa25.6■■□□□ 1.69
PTPA-206ENST00000358994 PPP1R15AO75807 674 aaPredicted RBP25.6■■□□□ 1.69
PTPA-206ENST00000358994 FANCIQ9NVI1 1328 aa25.58■■□□□ 1.69
PTPA-206ENST00000358994 WDR97A6NE52 1622 aa25.57■■□□□ 1.68
PTPA-206ENST00000358994 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
PTPA-206ENST00000358994 CCER2I3L3R5 266 aa25.54■■□□□ 1.68
PTPA-206ENST00000358994 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
PTPA-206ENST00000358994 PRXQ9BXM0 1461 aa25.46■■□□□ 1.67
PTPA-206ENST00000358994 ERICH6Q7L0X2 663 aa25.45■■□□□ 1.66
PTPA-206ENST00000358994 SIN3AQ96ST3 1273 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms