RNA–Protein interactions for RNA: ENST00000638692.1

PTPRVP-203, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 1,189 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-203ENST00000638692 NISCHQ9Y2I1 1504 aa42.36■■■■■ 4.37
PTPRVP-203ENST00000638692 CCDC180Q9P1Z9 1646 aa37.64■■■■□ 3.62
PTPRVP-203ENST00000638692 ABCC9O60706 1549 aa36.79■■■■□ 3.48
PTPRVP-203ENST00000638692 RB1CC1Q8TDY2 1594 aa35.37■■■■□ 3.25
PTPRVP-203ENST00000638692 NACADO15069 1562 aa35.35■■■■□ 3.25
PTPRVP-203ENST00000638692 DCAF8L2P0C7V8 631 aa35.32■■■■□ 3.24
PTPRVP-203ENST00000638692 ZCCHC6Q5VYS8 1495 aaKnown RBP35.29■■■■□ 3.24
PTPRVP-203ENST00000638692 MYO15BQ96JP2 1530 aa35.14■■■■□ 3.22
PTPRVP-203ENST00000638692 DCAF1Q9Y4B6 1507 aa35.03■■■■□ 3.2
PTPRVP-203ENST00000638692 UNC13AQ9UPW8 1703 aa34.72■■■■□ 3.15
PTPRVP-203ENST00000638692 BICRAQ9NZM4 1560 aa34.4■■■■□ 3.1
PTPRVP-203ENST00000638692 PABPN1Q86U42 306 aaKnown RBP eCLIP34.39■■■■□ 3.1
PTPRVP-203ENST00000638692 SCRIBQ14160 1630 aa34.36■■■■□ 3.09
PTPRVP-203ENST00000638692 SHROOM4Q9ULL8 1493 aa33.89■■■■□ 3.02
PTPRVP-203ENST00000638692 DNAJC5BQ9UF47 199 aa33.8■■■■□ 3
PTPRVP-203ENST00000638692 EIF4G1Q04637 1599 aaKnown RBP33.43■■■□□ 2.94
PTPRVP-203ENST00000638692 CC2D2AQ9P2K1 1620 aa33.3■■■□□ 2.92
PTPRVP-203ENST00000638692 CECR2Q9BXF3 1484 aa33.04■■■□□ 2.88
PTPRVP-203ENST00000638692 SMARCA4P51532 1647 aa32.88■■■□□ 2.85
PTPRVP-203ENST00000638692 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
PTPRVP-203ENST00000638692 MROH2BQ7Z745 1585 aa32.68■■■□□ 2.82
PTPRVP-203ENST00000638692 ATAD2BQ9ULI0 1458 aa32.67■■■□□ 2.82
PTPRVP-203ENST00000638692 NCAPD3P42695 1498 aa32.63■■■□□ 2.81
PTPRVP-203ENST00000638692 SMARCA2P51531 1590 aa32.58■■■□□ 2.81
PTPRVP-203ENST00000638692 PEG3Q9GZU2 1588 aa32.54■■■□□ 2.8
PTPRVP-203ENST00000638692 HMGXB3Q12766 1538 aa32.46■■■□□ 2.79
PTPRVP-203ENST00000638692 BAZ1BQ9UIG0 1483 aaKnown RBP32.36■■■□□ 2.77
PTPRVP-203ENST00000638692 WIZO95785 1651 aa32.36■■■□□ 2.77
PTPRVP-203ENST00000638692 RSF1Q96T23 1441 aaPredicted RBP32.3■■■□□ 2.76
PTPRVP-203ENST00000638692 TOP2AP11388 1531 aaKnown RBP31.95■■■□□ 2.7
PTPRVP-203ENST00000638692 NESP48681 1621 aa31.89■■■□□ 2.7
PTPRVP-203ENST00000638692 LAMC3Q9Y6N6 1575 aa31.75■■■□□ 2.67
PTPRVP-203ENST00000638692 CADPSQ9ULU8 1353 aa31.67■■■□□ 2.66
PTPRVP-203ENST00000638692 ERCC6Q03468 1493 aa31.63■■■□□ 2.65
PTPRVP-203ENST00000638692 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
PTPRVP-203ENST00000638692 KIF21AQ7Z4S6 1674 aa31.53■■■□□ 2.64
PTPRVP-203ENST00000638692 CFTRP13569 1480 aa31.51■■■□□ 2.63
PTPRVP-203ENST00000638692 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
PTPRVP-203ENST00000638692 SUPT5HO00267 1087 aaKnown RBP31.48■■■□□ 2.63
PTPRVP-203ENST00000638692 THOC2Q8NI27 1593 aaKnown RBP31.39■■■□□ 2.61
PTPRVP-203ENST00000638692 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
PTPRVP-203ENST00000638692 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
PTPRVP-203ENST00000638692 CUX2O14529 1486 aa31.3■■■□□ 2.6
PTPRVP-203ENST00000638692 CEP164Q9UPV0 1460 aa31.25■■■□□ 2.59
PTPRVP-203ENST00000638692 MRC2Q9UBG0 1479 aa31.2■■■□□ 2.58
PTPRVP-203ENST00000638692 WDR62O43379 1518 aa31.12■■■□□ 2.57
PTPRVP-203ENST00000638692 URB2Q14146 1524 aaKnown RBP31.03■■■□□ 2.56
PTPRVP-203ENST00000638692 TOPBP1Q92547 1522 aa30.84■■■□□ 2.53
PTPRVP-203ENST00000638692 DNMBPQ6XZF7 1577 aa30.79■■■□□ 2.52
PTPRVP-203ENST00000638692 ABCC8Q09428 1581 aa30.77■■■□□ 2.52
PTPRVP-203ENST00000638692 CUX1P39880 1505 aa30.65■■■□□ 2.5
PTPRVP-203ENST00000638692 IFT140Q96RY7 1462 aa30.58■■■□□ 2.49
PTPRVP-203ENST00000638692 POLA1P09884 1462 aaPredicted RBP30.57■■■□□ 2.48
PTPRVP-203ENST00000638692 DNAJC5Q9H3Z4 198 aa30.55■■■□□ 2.48
PTPRVP-203ENST00000638692 TARBP1Q13395 1621 aaKnown RBP30.54■■■□□ 2.48
PTPRVP-203ENST00000638692 ZNF608Q9ULD9 1512 aaPredicted RBP30.52■■■□□ 2.48
PTPRVP-203ENST00000638692 FGD5Q6ZNL6 1462 aa30.5■■■□□ 2.47
PTPRVP-203ENST00000638692 RAD54L2Q9Y4B4 1467 aa30.46■■■□□ 2.47
PTPRVP-203ENST00000638692 SOGA1O94964 1423 aa30.43■■■□□ 2.46
PTPRVP-203ENST00000638692 SYNJ1O43426 1573 aa30.41■■■□□ 2.46
PTPRVP-203ENST00000638692 WRNQ14191 1432 aaPredicted RBP eCLIP30.4■■■□□ 2.466e-7■■■■■ 33.4
PTPRVP-203ENST00000638692 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
PTPRVP-203ENST00000638692 EIF4G3O43432 1585 aaKnown RBP30.38■■■□□ 2.45
PTPRVP-203ENST00000638692 TOP2BQ02880 1626 aa30.37■■■□□ 2.45
PTPRVP-203ENST00000638692 AQRO60306 1485 aaKnown RBP eCLIP30.33■■■□□ 2.452e-8■■■■■ 39.3
PTPRVP-203ENST00000638692 WDR97A6NE52 1622 aa30.31■■■□□ 2.44
PTPRVP-203ENST00000638692 TDRD9Q8NDG6 1382 aaKnown RBP30.28■■■□□ 2.44
PTPRVP-203ENST00000638692 ABCA10Q8WWZ4 1543 aa30.2■■■□□ 2.42
PTPRVP-203ENST00000638692 ABCA5Q8WWZ7 1642 aa30.11■■■□□ 2.41
PTPRVP-203ENST00000638692 GAPVD1Q14C86 1478 aa30.08■■■□□ 2.41
PTPRVP-203ENST00000638692 PBRM1Q86U86 1689 aa30.07■■■□□ 2.41
PTPRVP-203ENST00000638692 GRIN2BQ13224 1484 aa30.05■■■□□ 2.4
PTPRVP-203ENST00000638692 CHD1O14646 1710 aa30.03■■■□□ 2.4
PTPRVP-203ENST00000638692 SNAPC4Q5SXM2 1469 aa30.03■■■□□ 2.4
PTPRVP-203ENST00000638692 OSCARQ8IYS5 282 aa30■■■□□ 2.39
PTPRVP-203ENST00000638692 MAGI1Q96QZ7 1491 aaPredicted RBP29.96■■■□□ 2.39
PTPRVP-203ENST00000638692 FBLN2P98095 1184 aa29.89■■■□□ 2.38
PTPRVP-203ENST00000638692 SYNJ2O15056 1496 aa29.86■■■□□ 2.37
PTPRVP-203ENST00000638692 ERICH3Q5RHP9 1530 aa29.83■■■□□ 2.37
PTPRVP-203ENST00000638692 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
PTPRVP-203ENST00000638692 ADAMTS12P58397 1594 aa29.81■■■□□ 2.36
PTPRVP-203ENST00000638692 KIF27Q86VH2 1401 aa29.74■■■□□ 2.35
PTPRVP-203ENST00000638692 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
PTPRVP-203ENST00000638692 TRIM41Q8WV44 630 aa29.7■■■□□ 2.35
PTPRVP-203ENST00000638692 GRIN2AQ12879 1464 aa29.68■■■□□ 2.34
PTPRVP-203ENST00000638692 IGF1RP08069 1367 aa29.68■■■□□ 2.34
PTPRVP-203ENST00000638692 CLASP1Q7Z460 1538 aa29.67■■■□□ 2.34
PTPRVP-203ENST00000638692 RUSC2Q8N2Y8 1516 aa29.61■■■□□ 2.33
PTPRVP-203ENST00000638692 RIMBP3CA6NJZ7 1639 aa29.6■■■□□ 2.33
PTPRVP-203ENST00000638692 RIMBP3BA6NNM3 1639 aa29.6■■■□□ 2.33
PTPRVP-203ENST00000638692 RIMBP3Q9UFD9 1639 aa29.6■■■□□ 2.33
PTPRVP-203ENST00000638692 CEP170Q5SW79 1584 aa29.58■■■□□ 2.33
PTPRVP-203ENST00000638692 CUL7Q14999 1698 aa29.57■■■□□ 2.32
PTPRVP-203ENST00000638692 ARHGEF11O15085 1522 aa29.56■■■□□ 2.32
PTPRVP-203ENST00000638692 NUP160Q12769 1436 aa29.56■■■□□ 2.32
PTPRVP-203ENST00000638692 CARMIL1Q5VZK9 1371 aa29.47■■■□□ 2.31
PTPRVP-203ENST00000638692 CHIC1Q5VXU3 224 aa29.44■■■□□ 2.3
PTPRVP-203ENST00000638692 SHROOM2Q13796 1616 aa29.37■■■□□ 2.29
PTPRVP-203ENST00000638692 ARAP1Q96P48 1450 aa29.35■■■□□ 2.29
PTPRVP-203ENST00000638692 ERCC6L2Q5T890 1561 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms