RNA–Protein interactions for RNA: ENST00000455292.5

PTPA-226, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 5

Gene PTPA, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-226ENST00000455292 NISCHQ9Y2I1 1504 aa47.91■■■■■ 5.26
PTPA-226ENST00000455292 CCDC180Q9P1Z9 1646 aa42.71■■■■■ 4.43
PTPA-226ENST00000455292 ABCC9O60706 1549 aa42.08■■■■■ 4.33
PTPA-226ENST00000455292 RB1CC1Q8TDY2 1594 aa40.3■■■■■ 4.04
PTPA-226ENST00000455292 NACADO15069 1562 aa40.17■■■■■ 4.02
PTPA-226ENST00000455292 DCAF8L2P0C7V8 631 aa40.16■■■■■ 4.02
PTPA-226ENST00000455292 ZCCHC6Q5VYS8 1495 aaKnown RBP39.85■■■■□ 3.97
PTPA-226ENST00000455292 MYO15BQ96JP2 1530 aa39.79■■■■□ 3.96
PTPA-226ENST00000455292 DCAF1Q9Y4B6 1507 aa39.55■■■■□ 3.92
PTPA-226ENST00000455292 UNC13AQ9UPW8 1703 aa39.54■■■■□ 3.92
PTPA-226ENST00000455292 PABPN1Q86U42 306 aaKnown RBP eCLIP39.28■■■■□ 3.88
PTPA-226ENST00000455292 BICRAQ9NZM4 1560 aa39.16■■■■□ 3.86
PTPA-226ENST00000455292 SCRIBQ14160 1630 aa39.02■■■■□ 3.84
PTPA-226ENST00000455292 DNAJC5BQ9UF47 199 aa38.87■■■■□ 3.81
PTPA-226ENST00000455292 SHROOM4Q9ULL8 1493 aa38.56■■■■□ 3.76
PTPA-226ENST00000455292 EIF4G1Q04637 1599 aaKnown RBP38.11■■■■□ 3.69
PTPA-226ENST00000455292 CC2D2AQ9P2K1 1620 aa38.05■■■■□ 3.68
PTPA-226ENST00000455292 CECR2Q9BXF3 1484 aa37.78■■■■□ 3.64
PTPA-226ENST00000455292 SMARCA4P51532 1647 aa37.26■■■■□ 3.56
PTPA-226ENST00000455292 BAZ1AQ9NRL2 1556 aaPredicted RBP37.12■■■■□ 3.53
PTPA-226ENST00000455292 ATAD2BQ9ULI0 1458 aa37.07■■■■□ 3.53
PTPA-226ENST00000455292 NCAPD3P42695 1498 aa37.06■■■■□ 3.52
PTPA-226ENST00000455292 SMARCA2P51531 1590 aa37■■■■□ 3.51
PTPA-226ENST00000455292 MROH2BQ7Z745 1585 aa36.97■■■■□ 3.51
PTPA-226ENST00000455292 HMGXB3Q12766 1538 aa36.87■■■■□ 3.49
PTPA-226ENST00000455292 PEG3Q9GZU2 1588 aa36.84■■■■□ 3.49
PTPA-226ENST00000455292 BAZ1BQ9UIG0 1483 aaKnown RBP36.76■■■■□ 3.48
PTPA-226ENST00000455292 WIZO95785 1651 aa36.6■■■■□ 3.45
PTPA-226ENST00000455292 RSF1Q96T23 1441 aaPredicted RBP36.42■■■■□ 3.42
PTPA-226ENST00000455292 NESP48681 1621 aa36.37■■■■□ 3.41
PTPA-226ENST00000455292 ERCC6Q03468 1493 aa36.23■■■■□ 3.39
PTPA-226ENST00000455292 LAMC3Q9Y6N6 1575 aa36.15■■■■□ 3.38
PTPA-226ENST00000455292 TOP2AP11388 1531 aaKnown RBP36.11■■■■□ 3.37
PTPA-226ENST00000455292 CADPSQ9ULU8 1353 aa35.97■■■■□ 3.35
PTPA-226ENST00000455292 KIF21AQ7Z4S6 1674 aa35.95■■■■□ 3.35
PTPA-226ENST00000455292 CUX2O14529 1486 aa35.89■■■■□ 3.34
PTPA-226ENST00000455292 PDS5BQ9NTI5 1447 aa35.87■■■■□ 3.33
PTPA-226ENST00000455292 THOC2Q8NI27 1593 aaKnown RBP35.85■■■■□ 3.33
PTPA-226ENST00000455292 CFTRP13569 1480 aa35.72■■■■□ 3.31
PTPA-226ENST00000455292 CCDC88BA6NC98 1476 aa35.7■■■■□ 3.31
PTPA-226ENST00000455292 FANCD2Q9BXW9 1451 aa35.6■■■■□ 3.29
PTPA-226ENST00000455292 MRC2Q9UBG0 1479 aa35.57■■■■□ 3.28
PTPA-226ENST00000455292 CEP164Q9UPV0 1460 aa35.56■■■■□ 3.28
PTPA-226ENST00000455292 PRDM2Q13029 1718 aa35.52■■■■□ 3.28
PTPA-226ENST00000455292 WDR62O43379 1518 aa35.47■■■■□ 3.27
PTPA-226ENST00000455292 SUPT5HO00267 1087 aaKnown RBP35.34■■■■□ 3.25
PTPA-226ENST00000455292 URB2Q14146 1524 aaKnown RBP35.3■■■■□ 3.24
PTPA-226ENST00000455292 DNAJC5Q9H3Z4 198 aa35.11■■■■□ 3.21
PTPA-226ENST00000455292 TOPBP1Q92547 1522 aa35.01■■■■□ 3.2
PTPA-226ENST00000455292 DNMBPQ6XZF7 1577 aa34.95■■■■□ 3.18
PTPA-226ENST00000455292 ABCC8Q09428 1581 aa34.9■■■■□ 3.18
PTPA-226ENST00000455292 IFT140Q96RY7 1462 aa34.8■■■■□ 3.16
PTPA-226ENST00000455292 ZNF608Q9ULD9 1512 aaPredicted RBP34.76■■■■□ 3.15
PTPA-226ENST00000455292 POLA1P09884 1462 aaPredicted RBP34.7■■■■□ 3.15
PTPA-226ENST00000455292 CUX1P39880 1505 aa34.69■■■■□ 3.14
PTPA-226ENST00000455292 TARBP1Q13395 1621 aaKnown RBP34.68■■■■□ 3.14
PTPA-226ENST00000455292 EIF4G3O43432 1585 aaKnown RBP34.61■■■■□ 3.13
PTPA-226ENST00000455292 FGD5Q6ZNL6 1462 aa34.59■■■■□ 3.13
PTPA-226ENST00000455292 RAD54L2Q9Y4B4 1467 aa34.59■■■■□ 3.13
PTPA-226ENST00000455292 SOGA1O94964 1423 aa34.53■■■■□ 3.12
PTPA-226ENST00000455292 AQRO60306 1485 aaKnown RBP eCLIP34.51■■■■□ 3.113e-7■■■□□ 15.4
PTPA-226ENST00000455292 TDRD9Q8NDG6 1382 aaKnown RBP34.41■■■■□ 3.1
PTPA-226ENST00000455292 OSCARQ8IYS5 282 aa34.36■■■■□ 3.09
PTPA-226ENST00000455292 WDR97A6NE52 1622 aa34.36■■■■□ 3.09
PTPA-226ENST00000455292 SYNJ1O43426 1573 aa34.33■■■■□ 3.09
PTPA-226ENST00000455292 WRNQ14191 1432 aaPredicted RBP eCLIP34.32■■■■□ 3.08
PTPA-226ENST00000455292 BIVM-ERCC5R4GMW8 1640 aa34.32■■■■□ 3.08
PTPA-226ENST00000455292 TOP2BQ02880 1626 aa34.3■■■■□ 3.08
PTPA-226ENST00000455292 CHD1O14646 1710 aa34.27■■■■□ 3.08
PTPA-226ENST00000455292 ABCA10Q8WWZ4 1543 aa34.2■■■■□ 3.07
PTPA-226ENST00000455292 SNAPC4Q5SXM2 1469 aa34.18■■■■□ 3.06
PTPA-226ENST00000455292 PBRM1Q86U86 1689 aa34.15■■■■□ 3.06
PTPA-226ENST00000455292 GRIN2BQ13224 1484 aa34.14■■■■□ 3.06
PTPA-226ENST00000455292 ABCA5Q8WWZ7 1642 aa34.14■■■■□ 3.06
PTPA-226ENST00000455292 GAPVD1Q14C86 1478 aa34.14■■■■□ 3.06
PTPA-226ENST00000455292 FBLN2P98095 1184 aa34.13■■■■□ 3.05
PTPA-226ENST00000455292 MAGI1Q96QZ7 1491 aaPredicted RBP34.07■■■■□ 3.04
PTPA-226ENST00000455292 SYNJ2O15056 1496 aa33.95■■■■□ 3.03
PTPA-226ENST00000455292 CHMP7Q8WUX9 453 aaPredicted RBP33.95■■■■□ 3.03
PTPA-226ENST00000455292 RIMBP3CA6NJZ7 1639 aa33.94■■■■□ 3.02
PTPA-226ENST00000455292 RIMBP3BA6NNM3 1639 aa33.94■■■■□ 3.02
PTPA-226ENST00000455292 RIMBP3Q9UFD9 1639 aa33.94■■■■□ 3.02
PTPA-226ENST00000455292 TRIM41Q8WV44 630 aa33.92■■■■□ 3.02
PTPA-226ENST00000455292 ARHGEF11O15085 1522 aa33.88■■■■□ 3.01
PTPA-226ENST00000455292 ADAMTS12P58397 1594 aa33.83■■■■□ 3.01
PTPA-226ENST00000455292 CLASP1Q7Z460 1538 aa33.82■■■■□ 3
PTPA-226ENST00000455292 ERICH3Q5RHP9 1530 aa33.78■■■■□ 3
PTPA-226ENST00000455292 GRIN2AQ12879 1464 aa33.73■■■□□ 2.99
PTPA-226ENST00000455292 FHAD1B1AJZ9 1412 aa33.7■■■□□ 2.99
PTPA-226ENST00000455292 CEP170Q5SW79 1584 aa33.62■■■□□ 2.97
PTPA-226ENST00000455292 ARAP1Q96P48 1450 aa33.6■■■□□ 2.97
PTPA-226ENST00000455292 KIF27Q86VH2 1401 aa33.6■■■□□ 2.97
PTPA-226ENST00000455292 NUP160Q12769 1436 aa33.57■■■□□ 2.96
PTPA-226ENST00000455292 CYB5RLQ6IPT4 315 aa33.57■■■□□ 2.96
PTPA-226ENST00000455292 IGF1RP08069 1367 aa33.51■■■□□ 2.96
PTPA-226ENST00000455292 CUL7Q14999 1698 aa33.45■■■□□ 2.95
PTPA-226ENST00000455292 ERCC6L2Q5T890 1561 aa33.41■■■□□ 2.94
PTPA-226ENST00000455292 SHROOM2Q13796 1616 aa33.39■■■□□ 2.93
PTPA-226ENST00000455292 RUSC2Q8N2Y8 1516 aa33.34■■■□□ 2.93
PTPA-226ENST00000455292 CARMIL1Q5VZK9 1371 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms