RNA–Protein interactions for RNA: ENST00000454635.6

LINC00963-207, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 910 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-207ENST00000454635 NISCHQ9Y2I1 1504 aa26.03■■□□□ 1.76
LINC00963-207ENST00000454635 CCDC180Q9P1Z9 1646 aa23.46■■□□□ 1.35
LINC00963-207ENST00000454635 ABCC9O60706 1549 aa22.83■■□□□ 1.25
LINC00963-207ENST00000454635 RB1CC1Q8TDY2 1594 aa22.08■■□□□ 1.13
LINC00963-207ENST00000454635 NACADO15069 1562 aa21.99■■□□□ 1.11
LINC00963-207ENST00000454635 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
LINC00963-207ENST00000454635 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
LINC00963-207ENST00000454635 ZCCHC6Q5VYS8 1495 aaKnown RBP21.66■■□□□ 1.06
LINC00963-207ENST00000454635 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
LINC00963-207ENST00000454635 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
LINC00963-207ENST00000454635 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
LINC00963-207ENST00000454635 SHROOM4Q9ULL8 1493 aa21.24■□□□□ 0.99
LINC00963-207ENST00000454635 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
LINC00963-207ENST00000454635 PABPN1Q86U42 306 aaKnown RBP eCLIP21.17■□□□□ 0.98
LINC00963-207ENST00000454635 DNAJC5BQ9UF47 199 aa20.91■□□□□ 0.94
LINC00963-207ENST00000454635 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
LINC00963-207ENST00000454635 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
LINC00963-207ENST00000454635 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
LINC00963-207ENST00000454635 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
LINC00963-207ENST00000454635 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
LINC00963-207ENST00000454635 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
LINC00963-207ENST00000454635 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
LINC00963-207ENST00000454635 NCAPD3P42695 1498 aa20.18■□□□□ 0.82
LINC00963-207ENST00000454635 PEG3Q9GZU2 1588 aa20.13■□□□□ 0.81
LINC00963-207ENST00000454635 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
LINC00963-207ENST00000454635 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
LINC00963-207ENST00000454635 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
LINC00963-207ENST00000454635 WIZO95785 1651 aa19.86■□□□□ 0.77
LINC00963-207ENST00000454635 LAMC3Q9Y6N6 1575 aa19.82■□□□□ 0.76
LINC00963-207ENST00000454635 ERCC6Q03468 1493 aa19.8■□□□□ 0.76
LINC00963-207ENST00000454635 CUX2O14529 1486 aa19.69■□□□□ 0.74
LINC00963-207ENST00000454635 NESP48681 1621 aa19.67■□□□□ 0.74
LINC00963-207ENST00000454635 RSF1Q96T23 1441 aaPredicted RBP19.67■□□□□ 0.74
LINC00963-207ENST00000454635 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
LINC00963-207ENST00000454635 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
LINC00963-207ENST00000454635 PDS5BQ9NTI5 1447 aa19.6■□□□□ 0.73
LINC00963-207ENST00000454635 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
LINC00963-207ENST00000454635 THOC2Q8NI27 1593 aaKnown RBP19.58■□□□□ 0.73
LINC00963-207ENST00000454635 CADPSQ9ULU8 1353 aa19.55■□□□□ 0.72
LINC00963-207ENST00000454635 CFTRP13569 1480 aa19.42■□□□□ 0.7
LINC00963-207ENST00000454635 CEP164Q9UPV0 1460 aa19.41■□□□□ 0.7
LINC00963-207ENST00000454635 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
LINC00963-207ENST00000454635 WDR62O43379 1518 aa19.37■□□□□ 0.69
LINC00963-207ENST00000454635 FANCD2Q9BXW9 1451 aa19.36■□□□□ 0.69
LINC00963-207ENST00000454635 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
LINC00963-207ENST00000454635 DNAJC5Q9H3Z4 198 aa19.16■□□□□ 0.66
LINC00963-207ENST00000454635 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
LINC00963-207ENST00000454635 ABCC8Q09428 1581 aa19.15■□□□□ 0.66
LINC00963-207ENST00000454635 DNMBPQ6XZF7 1577 aa19.08■□□□□ 0.65
LINC00963-207ENST00000454635 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
LINC00963-207ENST00000454635 IFT140Q96RY7 1462 aa18.99■□□□□ 0.63
LINC00963-207ENST00000454635 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
LINC00963-207ENST00000454635 EIF4G3O43432 1585 aaKnown RBP18.91■□□□□ 0.62
LINC00963-207ENST00000454635 WDR97A6NE52 1622 aa18.89■□□□□ 0.62
LINC00963-207ENST00000454635 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.62
LINC00963-207ENST00000454635 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
LINC00963-207ENST00000454635 ZNF608Q9ULD9 1512 aaPredicted RBP18.81■□□□□ 0.6
LINC00963-207ENST00000454635 CUX1P39880 1505 aa18.79■□□□□ 0.6
LINC00963-207ENST00000454635 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
LINC00963-207ENST00000454635 CHD1O14646 1710 aa18.76■□□□□ 0.59
LINC00963-207ENST00000454635 SOGA1O94964 1423 aa18.74■□□□□ 0.59
LINC00963-207ENST00000454635 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
LINC00963-207ENST00000454635 PBRM1Q86U86 1689 aa18.73■□□□□ 0.59
LINC00963-207ENST00000454635 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
LINC00963-207ENST00000454635 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
LINC00963-207ENST00000454635 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
LINC00963-207ENST00000454635 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.58
LINC00963-207ENST00000454635 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
LINC00963-207ENST00000454635 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
LINC00963-207ENST00000454635 ABCA5Q8WWZ7 1642 aa18.63■□□□□ 0.57
LINC00963-207ENST00000454635 ABCA10Q8WWZ4 1543 aa18.62■□□□□ 0.57
LINC00963-207ENST00000454635 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
LINC00963-207ENST00000454635 SYNJ1O43426 1573 aa18.6■□□□□ 0.57
LINC00963-207ENST00000454635 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
LINC00963-207ENST00000454635 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
LINC00963-207ENST00000454635 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
LINC00963-207ENST00000454635 RIMBP3CA6NJZ7 1639 aa18.55■□□□□ 0.56
LINC00963-207ENST00000454635 RIMBP3BA6NNM3 1639 aa18.55■□□□□ 0.56
LINC00963-207ENST00000454635 RIMBP3Q9UFD9 1639 aa18.55■□□□□ 0.56
LINC00963-207ENST00000454635 SYNJ2O15056 1496 aa18.52■□□□□ 0.56
LINC00963-207ENST00000454635 FBLN2P98095 1184 aa18.49■□□□□ 0.55
LINC00963-207ENST00000454635 ARHGEF11O15085 1522 aa18.48■□□□□ 0.55
LINC00963-207ENST00000454635 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
LINC00963-207ENST00000454635 CHMP7Q8WUX9 453 aaPredicted RBP18.45■□□□□ 0.54
LINC00963-207ENST00000454635 ADAMTS12P58397 1594 aa18.45■□□□□ 0.54
LINC00963-207ENST00000454635 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
LINC00963-207ENST00000454635 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
LINC00963-207ENST00000454635 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
LINC00963-207ENST00000454635 CUL7Q14999 1698 aa18.35■□□□□ 0.53
LINC00963-207ENST00000454635 FHAD1B1AJZ9 1412 aa18.35■□□□□ 0.53
LINC00963-207ENST00000454635 KIF27Q86VH2 1401 aa18.28■□□□□ 0.52
LINC00963-207ENST00000454635 CEP170Q5SW79 1584 aa18.28■□□□□ 0.52
LINC00963-207ENST00000454635 ARAP1Q96P48 1450 aa18.26■□□□□ 0.51
LINC00963-207ENST00000454635 NUP160Q12769 1436 aa18.26■□□□□ 0.51
LINC00963-207ENST00000454635 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
LINC00963-207ENST00000454635 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
LINC00963-207ENST00000454635 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
LINC00963-207ENST00000454635 IGF1RP08069 1367 aa18.1■□□□□ 0.49
LINC00963-207ENST00000454635 ERCC6L2Q5T890 1561 aa18.06■□□□□ 0.48
LINC00963-207ENST00000454635 KIAA0586Q9BVV6 1533 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms