RNA–Protein interactions for RNA: ENST00000622120.1

LINC00963-213, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 355 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-213ENST00000622120 NISCHQ9Y2I1 1504 aa30.66■■■□□ 2.5
LINC00963-213ENST00000622120 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
LINC00963-213ENST00000622120 ABCC9O60706 1549 aa27.06■■□□□ 1.92
LINC00963-213ENST00000622120 RB1CC1Q8TDY2 1594 aa25.93■■□□□ 1.74
LINC00963-213ENST00000622120 NACADO15069 1562 aa25.82■■□□□ 1.72
LINC00963-213ENST00000622120 DCAF8L2P0C7V8 631 aa25.79■■□□□ 1.72
LINC00963-213ENST00000622120 MYO15BQ96JP2 1530 aa25.55■■□□□ 1.68
LINC00963-213ENST00000622120 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
LINC00963-213ENST00000622120 UNC13AQ9UPW8 1703 aa25.35■■□□□ 1.65
LINC00963-213ENST00000622120 DCAF1Q9Y4B6 1507 aa25.35■■□□□ 1.65
LINC00963-213ENST00000622120 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.63
LINC00963-213ENST00000622120 BICRAQ9NZM4 1560 aa25.11■■□□□ 1.61
LINC00963-213ENST00000622120 DNAJC5BQ9UF47 199 aa25.05■■□□□ 1.6
LINC00963-213ENST00000622120 SCRIBQ14160 1630 aa24.99■■□□□ 1.59
LINC00963-213ENST00000622120 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
LINC00963-213ENST00000622120 EIF4G1Q04637 1599 aaKnown RBP24.49■■□□□ 1.51
LINC00963-213ENST00000622120 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
LINC00963-213ENST00000622120 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
LINC00963-213ENST00000622120 SMARCA4P51532 1647 aa23.86■■□□□ 1.41
LINC00963-213ENST00000622120 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
LINC00963-213ENST00000622120 BAZ1AQ9NRL2 1556 aaPredicted RBP23.8■■□□□ 1.4
LINC00963-213ENST00000622120 ATAD2BQ9ULI0 1458 aa23.78■■□□□ 1.4
LINC00963-213ENST00000622120 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
LINC00963-213ENST00000622120 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
LINC00963-213ENST00000622120 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
LINC00963-213ENST00000622120 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
LINC00963-213ENST00000622120 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
LINC00963-213ENST00000622120 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
LINC00963-213ENST00000622120 WIZO95785 1651 aa23.38■■□□□ 1.33
LINC00963-213ENST00000622120 NESP48681 1621 aa23.33■■□□□ 1.32
LINC00963-213ENST00000622120 LAMC3Q9Y6N6 1575 aa23.25■■□□□ 1.31
LINC00963-213ENST00000622120 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
LINC00963-213ENST00000622120 CUX2O14529 1486 aa23.2■■□□□ 1.3
LINC00963-213ENST00000622120 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
LINC00963-213ENST00000622120 CADPSQ9ULU8 1353 aa23.11■■□□□ 1.29
LINC00963-213ENST00000622120 TOP2AP11388 1531 aaKnown RBP23.1■■□□□ 1.29
LINC00963-213ENST00000622120 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
LINC00963-213ENST00000622120 THOC2Q8NI27 1593 aaKnown RBP23.04■■□□□ 1.28
LINC00963-213ENST00000622120 CFTRP13569 1480 aa22.91■■□□□ 1.26
LINC00963-213ENST00000622120 MRC2Q9UBG0 1479 aa22.88■■□□□ 1.25
LINC00963-213ENST00000622120 CEP164Q9UPV0 1460 aa22.86■■□□□ 1.25
LINC00963-213ENST00000622120 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
LINC00963-213ENST00000622120 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.25
LINC00963-213ENST00000622120 DNAJC5Q9H3Z4 198 aa22.8■■□□□ 1.24
LINC00963-213ENST00000622120 WDR62O43379 1518 aa22.79■■□□□ 1.24
LINC00963-213ENST00000622120 PRDM2Q13029 1718 aa22.78■■□□□ 1.24
LINC00963-213ENST00000622120 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
LINC00963-213ENST00000622120 SUPT5HO00267 1087 aaKnown RBP22.51■■□□□ 1.19
LINC00963-213ENST00000622120 TOPBP1Q92547 1522 aa22.46■■□□□ 1.19
LINC00963-213ENST00000622120 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
LINC00963-213ENST00000622120 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
LINC00963-213ENST00000622120 IFT140Q96RY7 1462 aa22.39■■□□□ 1.17
LINC00963-213ENST00000622120 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
LINC00963-213ENST00000622120 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
LINC00963-213ENST00000622120 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
LINC00963-213ENST00000622120 EIF4G3O43432 1585 aaKnown RBP22.21■■□□□ 1.15
LINC00963-213ENST00000622120 OSCARQ8IYS5 282 aa22.21■■□□□ 1.15
LINC00963-213ENST00000622120 CUX1P39880 1505 aa22.18■■□□□ 1.14
LINC00963-213ENST00000622120 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
LINC00963-213ENST00000622120 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
LINC00963-213ENST00000622120 SOGA1O94964 1423 aa22.15■■□□□ 1.14
LINC00963-213ENST00000622120 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.14
LINC00963-213ENST00000622120 TDRD9Q8NDG6 1382 aaKnown RBP22.06■■□□□ 1.12
LINC00963-213ENST00000622120 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
LINC00963-213ENST00000622120 CHD1O14646 1710 aa22.02■■□□□ 1.12
LINC00963-213ENST00000622120 FBLN2P98095 1184 aa21.98■■□□□ 1.11
LINC00963-213ENST00000622120 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
LINC00963-213ENST00000622120 WRNQ14191 1432 aaPredicted RBP eCLIP21.95■■□□□ 1.1
LINC00963-213ENST00000622120 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
LINC00963-213ENST00000622120 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
LINC00963-213ENST00000622120 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
LINC00963-213ENST00000622120 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
LINC00963-213ENST00000622120 ABCA10Q8WWZ4 1543 aa21.93■■□□□ 1.1
LINC00963-213ENST00000622120 SYNJ1O43426 1573 aa21.91■■□□□ 1.1
LINC00963-213ENST00000622120 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
LINC00963-213ENST00000622120 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
LINC00963-213ENST00000622120 PBRM1Q86U86 1689 aa21.9■■□□□ 1.1
LINC00963-213ENST00000622120 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
LINC00963-213ENST00000622120 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
LINC00963-213ENST00000622120 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
LINC00963-213ENST00000622120 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
LINC00963-213ENST00000622120 ABCA5Q8WWZ7 1642 aa21.86■■□□□ 1.09
LINC00963-213ENST00000622120 ARHGEF11O15085 1522 aa21.83■■□□□ 1.09
LINC00963-213ENST00000622120 SYNJ2O15056 1496 aa21.82■■□□□ 1.08
LINC00963-213ENST00000622120 CLASP1Q7Z460 1538 aa21.72■■□□□ 1.07
LINC00963-213ENST00000622120 ADAMTS12P58397 1594 aa21.68■■□□□ 1.06
LINC00963-213ENST00000622120 ERICH3Q5RHP9 1530 aa21.67■■□□□ 1.06
LINC00963-213ENST00000622120 CYB5RLQ6IPT4 315 aa21.66■■□□□ 1.06
LINC00963-213ENST00000622120 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
LINC00963-213ENST00000622120 FHAD1B1AJZ9 1412 aa21.63■■□□□ 1.05
LINC00963-213ENST00000622120 ARAP1Q96P48 1450 aa21.63■■□□□ 1.05
LINC00963-213ENST00000622120 NUP160Q12769 1436 aa21.55■■□□□ 1.04
LINC00963-213ENST00000622120 CEP170Q5SW79 1584 aa21.54■■□□□ 1.04
LINC00963-213ENST00000622120 KIF27Q86VH2 1401 aa21.53■■□□□ 1.04
LINC00963-213ENST00000622120 CUL7Q14999 1698 aa21.44■■□□□ 1.02
LINC00963-213ENST00000622120 IGF1RP08069 1367 aa21.44■■□□□ 1.02
LINC00963-213ENST00000622120 SHROOM2Q13796 1616 aa21.43■■□□□ 1.02
LINC00963-213ENST00000622120 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
LINC00963-213ENST00000622120 RUSC2Q8N2Y8 1516 aa21.35■■□□□ 1.01
LINC00963-213ENST00000622120 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms