RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
KNOP1-201ENST00000219837 SUPT5HO00267 1087 aaKnown RBP18.1■□□□□ 0.49
KNOP1-201ENST00000219837 EHMT2Q96KQ7 1210 aa17.96■□□□□ 0.47
KNOP1-201ENST00000219837 SHROOM4Q9ULL8 1493 aa17.85■□□□□ 0.45
KNOP1-201ENST00000219837 NISCHQ9Y2I1 1504 aa17.59■□□□□ 0.41
KNOP1-201ENST00000219837 PELP1Q8IZL8 1130 aaKnown RBP17.56■□□□□ 0.4
KNOP1-201ENST00000219837 APLP2Q06481 763 aa17.5■□□□□ 0.39
KNOP1-201ENST00000219837 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
KNOP1-201ENST00000219837 TTBK1Q5TCY1 1321 aaPredicted RBP17.33■□□□□ 0.36
KNOP1-201ENST00000219837 RANGAP1P46060 587 aaPredicted RBP17.17■□□□□ 0.34
KNOP1-201ENST00000219837 ATP1B4Q9UN42 357 aaPredicted RBP17.09■□□□□ 0.33
KNOP1-201ENST00000219837 ERICH6Q7L0X2 663 aa17.02■□□□□ 0.31
KNOP1-201ENST00000219837 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
KNOP1-201ENST00000219837 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
KNOP1-201ENST00000219837 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
KNOP1-201ENST00000219837 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
KNOP1-201ENST00000219837 UBTFP17480 764 aaKnown RBP16.69■□□□□ 0.26
KNOP1-201ENST00000219837 ZEB1P37275 1124 aaPredicted RBP16.58■□□□□ 0.25
KNOP1-201ENST00000219837 MYT1LQ9UL68 1186 aa16.58■□□□□ 0.25
KNOP1-201ENST00000219837 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
KNOP1-201ENST00000219837 NEFLP07196 543 aa16.56■□□□□ 0.24
KNOP1-201ENST00000219837 PPARGC1BQ86YN6 1023 aaKnown RBP16.44■□□□□ 0.22
KNOP1-201ENST00000219837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.41■□□□□ 0.22
KNOP1-201ENST00000219837 HNRNPUL2Q1KMD3 747 aaKnown RBP16.41■□□□□ 0.22
KNOP1-201ENST00000219837 POLR3GLQ9BT43 218 aa16.41■□□□□ 0.22
KNOP1-201ENST00000219837 CHIC1Q5VXU3 224 aa16.38■□□□□ 0.21
KNOP1-201ENST00000219837 ITGAEP38570 1179 aa16.31■□□□□ 0.2
KNOP1-201ENST00000219837 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
KNOP1-201ENST00000219837 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
KNOP1-201ENST00000219837 CNGB1Q14028 1251 aaPredicted RBP16.23■□□□□ 0.19
KNOP1-201ENST00000219837 MYT1Q01538 1121 aa16.2■□□□□ 0.18
KNOP1-201ENST00000219837 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
KNOP1-201ENST00000219837 ZNF316A6NFI3 1004 aaPredicted RBP15.91■□□□□ 0.14
KNOP1-201ENST00000219837 CLSPNQ9HAW4 1339 aa15.89■□□□□ 0.13
KNOP1-201ENST00000219837 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
KNOP1-201ENST00000219837 TRIM52Q96A61 297 aa15.83■□□□□ 0.13
KNOP1-201ENST00000219837 LOC105371045A0A1W2PR82 267 aa15.82■□□□□ 0.12
KNOP1-201ENST00000219837 HRCP23327 699 aa15.8■□□□□ 0.12
KNOP1-201ENST00000219837 SLC24A1O60721 1099 aa15.75■□□□□ 0.11
KNOP1-201ENST00000219837 NEUROD1Q13562 356 aa15.72■□□□□ 0.11
KNOP1-201ENST00000219837 RTL5Q5HYW3 569 aaPredicted RBP15.7■□□□□ 0.1
KNOP1-201ENST00000219837 BCANQ96GW7 911 aa15.69■□□□□ 0.1
KNOP1-201ENST00000219837 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
KNOP1-201ENST00000219837 FBLN2P98095 1184 aa15.68■□□□□ 0.1
KNOP1-201ENST00000219837 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
KNOP1-201ENST00000219837 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
KNOP1-201ENST00000219837 BCL11AQ9H165 835 aa15.64■□□□□ 0.09
KNOP1-201ENST00000219837 ABCC9O60706 1549 aa15.61■□□□□ 0.09
KNOP1-201ENST00000219837 DIEXFQ68CQ4 756 aaKnown RBP15.57■□□□□ 0.08
KNOP1-201ENST00000219837 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
KNOP1-201ENST00000219837 ARID3CA6NKF2 412 aa15.5■□□□□ 0.07
KNOP1-201ENST00000219837 ANP32CO43423 234 aa15.49■□□□□ 0.07
KNOP1-201ENST00000219837 NEFMP07197 916 aa15.46■□□□□ 0.07
KNOP1-201ENST00000219837 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
KNOP1-201ENST00000219837 P3H3Q8IVL6 736 aa15.4■□□□□ 0.06
KNOP1-201ENST00000219837 CDK11AQ9UQ88 783 aaPredicted RBP15.39■□□□□ 0.05
KNOP1-201ENST00000219837 ZNF777Q9ULD5 760 aaPredicted RBP15.39■□□□□ 0.05
KNOP1-201ENST00000219837 ESF1Q9H501 851 aaKnown RBP15.36■□□□□ 0.05
KNOP1-201ENST00000219837 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
KNOP1-201ENST00000219837 CHGAP10645 457 aaKnown RBP15.27■□□□□ 0.04
KNOP1-201ENST00000219837 NPM2Q86SE8 214 aaKnown RBP15.22■□□□□ 0.03
KNOP1-201ENST00000219837 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
KNOP1-201ENST00000219837 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
KNOP1-201ENST00000219837 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
KNOP1-201ENST00000219837 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
KNOP1-201ENST00000219837 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
KNOP1-201ENST00000219837 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
KNOP1-201ENST00000219837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.08■□□□□ 03e-8■■□□□ 13.7
KNOP1-201ENST00000219837 A0A0G2JS52 829 aa15.07■□□□□ 0
KNOP1-201ENST00000219837 ANP32BQ92688 251 aaKnown RBP15.06■□□□□ 0
KNOP1-201ENST00000219837 ZBTB7CA1YPR0 619 aa15.05■□□□□ -0
KNOP1-201ENST00000219837 SALL2Q9Y467 1007 aaPredicted RBP15.02■□□□□ -0
KNOP1-201ENST00000219837 TONSLQ96HA7 1378 aa15.02■□□□□ -0
KNOP1-201ENST00000219837 PLEKHG5O94827 1062 aa15□□□□□ -0.01
KNOP1-201ENST00000219837 SENP3Q9H4L4 574 aaPredicted RBP14.99□□□□□ -0.01
KNOP1-201ENST00000219837 UPF2Q9HAU5 1272 aaKnown RBP14.99□□□□□ -0.01
KNOP1-201ENST00000219837 FAM9BQ8IZU0 186 aa14.99□□□□□ -0.01
KNOP1-201ENST00000219837 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
KNOP1-201ENST00000219837 CHIC2Q9UKJ5 165 aa14.96□□□□□ -0.01
KNOP1-201ENST00000219837 FKBP8Q14318 412 aa14.94□□□□□ -0.02
KNOP1-201ENST00000219837 WDR43Q15061 677 aaKnown RBP eCLIP14.93□□□□□ -0.02
KNOP1-201ENST00000219837 C14orf37Q86TY3 774 aa14.92□□□□□ -0.02
KNOP1-201ENST00000219837 KDM2AQ9Y2K7 1162 aa14.92□□□□□ -0.02
KNOP1-201ENST00000219837 HNRNPUQ00839 825 aaKnown RBP eCLIP14.91□□□□□ -0.02
KNOP1-201ENST00000219837 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.86□□□□□ -0.03
KNOP1-201ENST00000219837 ARXQ96QS3 562 aa14.86□□□□□ -0.03
KNOP1-201ENST00000219837 TMC1Q8TDI8 760 aa14.85□□□□□ -0.03
KNOP1-201ENST00000219837 DDX10Q13206 875 aaKnown RBP14.85□□□□□ -0.03
KNOP1-201ENST00000219837 ACIN1Q9UKV3 1341 aaKnown RBP14.84□□□□□ -0.03
KNOP1-201ENST00000219837 CDK11BP21127 795 aaKnown RBP14.84□□□□□ -0.03
KNOP1-201ENST00000219837 MYH16Q9H6N6 1097 aa14.84□□□□□ -0.03
KNOP1-201ENST00000219837 EIF5BO60841 1220 aaKnown RBP14.83□□□□□ -0.04
KNOP1-201ENST00000219837 PPP1R15AO75807 674 aaPredicted RBP14.82□□□□□ -0.04
KNOP1-201ENST00000219837 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
KNOP1-201ENST00000219837 HAP1P54257 671 aaPredicted RBP14.8□□□□□ -0.04
KNOP1-201ENST00000219837 TSPY4P0CV99 314 aa14.78□□□□□ -0.04
KNOP1-201ENST00000219837 TSPY10P0CW01 314 aa14.78□□□□□ -0.04
KNOP1-201ENST00000219837 NBR1Q14596 966 aa14.78□□□□□ -0.04
KNOP1-201ENST00000219837 CCDC136Q96JN2 1154 aa14.78□□□□□ -0.04
KNOP1-201ENST00000219837 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms