RNA–Protein interactions for RNA: ENST00000566659.1

PDPK1-215, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 3

Gene PDPK1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-215ENST00000566659 NISCHQ9Y2I1 1504 aa50.64■■■■■ 5.7
PDPK1-215ENST00000566659 CCDC180Q9P1Z9 1646 aa45.35■■■■■ 4.85
PDPK1-215ENST00000566659 ABCC9O60706 1549 aa44.86■■■■■ 4.77
PDPK1-215ENST00000566659 RB1CC1Q8TDY2 1594 aa42.92■■■■■ 4.46
PDPK1-215ENST00000566659 NACADO15069 1562 aa42.72■■■■■ 4.43
PDPK1-215ENST00000566659 DCAF8L2P0C7V8 631 aa42.45■■■■■ 4.39
PDPK1-215ENST00000566659 MYO15BQ96JP2 1530 aa42.26■■■■■ 4.36
PDPK1-215ENST00000566659 UNC13AQ9UPW8 1703 aa42.06■■■■■ 4.32
PDPK1-215ENST00000566659 ZCCHC6Q5VYS8 1495 aaKnown RBP42.06■■■■■ 4.32
PDPK1-215ENST00000566659 DCAF1Q9Y4B6 1507 aa41.87■■■■■ 4.29
PDPK1-215ENST00000566659 PABPN1Q86U42 306 aaKnown RBP eCLIP41.79■■■■■ 4.28
PDPK1-215ENST00000566659 DNAJC5BQ9UF47 199 aa41.71■■■■■ 4.27
PDPK1-215ENST00000566659 BICRAQ9NZM4 1560 aa41.68■■■■■ 4.26
PDPK1-215ENST00000566659 SCRIBQ14160 1630 aa41.29■■■■■ 4.2
PDPK1-215ENST00000566659 SHROOM4Q9ULL8 1493 aa41.15■■■■■ 4.18
PDPK1-215ENST00000566659 EIF4G1Q04637 1599 aaKnown RBP40.61■■■■■ 4.09
PDPK1-215ENST00000566659 CC2D2AQ9P2K1 1620 aa40.6■■■■■ 4.09
PDPK1-215ENST00000566659 CECR2Q9BXF3 1484 aa40.38■■■■■ 4.05
PDPK1-215ENST00000566659 SMARCA4P51532 1647 aa39.46■■■■□ 3.91
PDPK1-215ENST00000566659 NCAPD3P42695 1498 aa39.4■■■■□ 3.9
PDPK1-215ENST00000566659 ATAD2BQ9ULI0 1458 aa39.35■■■■□ 3.89
PDPK1-215ENST00000566659 SMARCA2P51531 1590 aa39.29■■■■□ 3.88
PDPK1-215ENST00000566659 BAZ1AQ9NRL2 1556 aaPredicted RBP39.29■■■■□ 3.88
PDPK1-215ENST00000566659 HMGXB3Q12766 1538 aa39.19■■■■□ 3.86
PDPK1-215ENST00000566659 PEG3Q9GZU2 1588 aa39.07■■■■□ 3.84
PDPK1-215ENST00000566659 MROH2BQ7Z745 1585 aa39.02■■■■□ 3.84
PDPK1-215ENST00000566659 BAZ1BQ9UIG0 1483 aaKnown RBP38.98■■■■□ 3.83
PDPK1-215ENST00000566659 ERCC6Q03468 1493 aa38.71■■■■□ 3.79
PDPK1-215ENST00000566659 NESP48681 1621 aa38.67■■■■□ 3.78
PDPK1-215ENST00000566659 WIZO95785 1651 aa38.6■■■■□ 3.77
PDPK1-215ENST00000566659 CUX2O14529 1486 aa38.54■■■■□ 3.76
PDPK1-215ENST00000566659 LAMC3Q9Y6N6 1575 aa38.49■■■■□ 3.75
PDPK1-215ENST00000566659 RSF1Q96T23 1441 aaPredicted RBP38.33■■■■□ 3.73
PDPK1-215ENST00000566659 KIF21AQ7Z4S6 1674 aa38.27■■■■□ 3.72
PDPK1-215ENST00000566659 THOC2Q8NI27 1593 aaKnown RBP38.26■■■■□ 3.72
PDPK1-215ENST00000566659 DNAJC5Q9H3Z4 198 aa38.25■■■■□ 3.71
PDPK1-215ENST00000566659 PDS5BQ9NTI5 1447 aa38.21■■■■□ 3.71
PDPK1-215ENST00000566659 CADPSQ9ULU8 1353 aa38.2■■■■□ 3.71
PDPK1-215ENST00000566659 TOP2AP11388 1531 aaKnown RBP38.13■■■■□ 3.69
PDPK1-215ENST00000566659 MRC2Q9UBG0 1479 aa37.89■■■■□ 3.66
PDPK1-215ENST00000566659 CFTRP13569 1480 aa37.88■■■■□ 3.65
PDPK1-215ENST00000566659 CEP164Q9UPV0 1460 aa37.81■■■■□ 3.64
PDPK1-215ENST00000566659 WDR62O43379 1518 aa37.8■■■■□ 3.64
PDPK1-215ENST00000566659 FANCD2Q9BXW9 1451 aa37.79■■■■□ 3.64
PDPK1-215ENST00000566659 PRDM2Q13029 1718 aa37.68■■■■□ 3.62
PDPK1-215ENST00000566659 CCDC88BA6NC98 1476 aa37.66■■■■□ 3.62
PDPK1-215ENST00000566659 URB2Q14146 1524 aaKnown RBP37.48■■■■□ 3.59
PDPK1-215ENST00000566659 TOPBP1Q92547 1522 aa37.14■■■■□ 3.54
PDPK1-215ENST00000566659 ABCC8Q09428 1581 aa37.08■■■■□ 3.53
PDPK1-215ENST00000566659 DNMBPQ6XZF7 1577 aa37.06■■■■□ 3.52
PDPK1-215ENST00000566659 IFT140Q96RY7 1462 aa37.04■■■■□ 3.52
PDPK1-215ENST00000566659 ZNF608Q9ULD9 1512 aaPredicted RBP36.94■■■■□ 3.5
PDPK1-215ENST00000566659 SUPT5HO00267 1087 aaKnown RBP36.87■■■■□ 3.49
PDPK1-215ENST00000566659 TARBP1Q13395 1621 aaKnown RBP36.82■■■■□ 3.49
PDPK1-215ENST00000566659 EIF4G3O43432 1585 aaKnown RBP36.8■■■■□ 3.48
PDPK1-215ENST00000566659 POLA1P09884 1462 aaPredicted RBP36.78■■■■□ 3.48
PDPK1-215ENST00000566659 OSCARQ8IYS5 282 aa36.77■■■■□ 3.48
PDPK1-215ENST00000566659 CUX1P39880 1505 aa36.65■■■■□ 3.46
PDPK1-215ENST00000566659 AQRO60306 1485 aaKnown RBP eCLIP36.63■■■■□ 3.453e-6■■■■□ 25.5
PDPK1-215ENST00000566659 RAD54L2Q9Y4B4 1467 aa36.62■■■■□ 3.45
PDPK1-215ENST00000566659 FGD5Q6ZNL6 1462 aa36.61■■■■□ 3.45
PDPK1-215ENST00000566659 SOGA1O94964 1423 aa36.59■■■■□ 3.45
PDPK1-215ENST00000566659 CHD1O14646 1710 aa36.5■■■■□ 3.43
PDPK1-215ENST00000566659 TRIM41Q8WV44 630 aa36.49■■■■□ 3.43
PDPK1-215ENST00000566659 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
PDPK1-215ENST00000566659 TDRD9Q8NDG6 1382 aaKnown RBP36.45■■■■□ 3.43
PDPK1-215ENST00000566659 RIMBP3CA6NJZ7 1639 aa36.35■■■■□ 3.41
PDPK1-215ENST00000566659 RIMBP3BA6NNM3 1639 aa36.35■■■■□ 3.41
PDPK1-215ENST00000566659 RIMBP3Q9UFD9 1639 aa36.35■■■■□ 3.41
PDPK1-215ENST00000566659 SNAPC4Q5SXM2 1469 aa36.3■■■■□ 3.4
PDPK1-215ENST00000566659 FBLN2P98095 1184 aa36.26■■■■□ 3.4
PDPK1-215ENST00000566659 GRIN2BQ13224 1484 aa36.24■■■■□ 3.39
PDPK1-215ENST00000566659 ARHGEF11O15085 1522 aa36.24■■■■□ 3.39
PDPK1-215ENST00000566659 MAGI1Q96QZ7 1491 aaPredicted RBP36.23■■■■□ 3.39
PDPK1-215ENST00000566659 PBRM1Q86U86 1689 aa36.23■■■■□ 3.39
PDPK1-215ENST00000566659 ABCA10Q8WWZ4 1543 aa36.22■■■■□ 3.39
PDPK1-215ENST00000566659 BIVM-ERCC5R4GMW8 1640 aa36.22■■■■□ 3.39
PDPK1-215ENST00000566659 TOP2BQ02880 1626 aa36.19■■■■□ 3.38
PDPK1-215ENST00000566659 GAPVD1Q14C86 1478 aa36.18■■■■□ 3.38
PDPK1-215ENST00000566659 ABCA5Q8WWZ7 1642 aa36.17■■■■□ 3.38
PDPK1-215ENST00000566659 SYNJ1O43426 1573 aa36.15■■■■□ 3.38
PDPK1-215ENST00000566659 WRNQ14191 1432 aaPredicted RBP eCLIP36.15■■■■□ 3.38
PDPK1-215ENST00000566659 SYNJ2O15056 1496 aa36.09■■■■□ 3.37
PDPK1-215ENST00000566659 CHMP7Q8WUX9 453 aaPredicted RBP36.07■■■■□ 3.36
PDPK1-215ENST00000566659 CLASP1Q7Z460 1538 aa36.04■■■■□ 3.36
PDPK1-215ENST00000566659 ARAP1Q96P48 1450 aa35.92■■■■□ 3.34
PDPK1-215ENST00000566659 CYB5RLQ6IPT4 315 aa35.88■■■■□ 3.33
PDPK1-215ENST00000566659 ADAMTS12P58397 1594 aa35.87■■■■□ 3.33
PDPK1-215ENST00000566659 GRIN2AQ12879 1464 aa35.79■■■■□ 3.32
PDPK1-215ENST00000566659 ERICH3Q5RHP9 1530 aa35.78■■■■□ 3.32
PDPK1-215ENST00000566659 FHAD1B1AJZ9 1412 aa35.73■■■■□ 3.31
PDPK1-215ENST00000566659 CEP170Q5SW79 1584 aa35.67■■■■□ 3.3
PDPK1-215ENST00000566659 NUP160Q12769 1436 aa35.66■■■■□ 3.3
PDPK1-215ENST00000566659 SHROOM2Q13796 1616 aa35.5■■■■□ 3.27
PDPK1-215ENST00000566659 ERCC6L2Q5T890 1561 aa35.49■■■■□ 3.27
PDPK1-215ENST00000566659 KIF27Q86VH2 1401 aa35.43■■■■□ 3.26
PDPK1-215ENST00000566659 CUL7Q14999 1698 aa35.37■■■■□ 3.25
PDPK1-215ENST00000566659 IGF1RP08069 1367 aa35.37■■■■□ 3.25
PDPK1-215ENST00000566659 RUSC2Q8N2Y8 1516 aa35.35■■■■□ 3.25
PDPK1-215ENST00000566659 TRHP20396 242 aaPredicted RBP35.34■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms