RNA–Protein interactions for RNA: ENST00000461780.1

PPARGC1B-206, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 4

Gene PPARGC1B, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-206ENST00000461780 NISCHQ9Y2I1 1504 aa39.06■■■■□ 3.84
PPARGC1B-206ENST00000461780 ABCC9O60706 1549 aa35.4■■■■□ 3.26
PPARGC1B-206ENST00000461780 CCDC180Q9P1Z9 1646 aa35.24■■■■□ 3.23
PPARGC1B-206ENST00000461780 DNAJC5BQ9UF47 199 aa33.61■■■□□ 2.97
PPARGC1B-206ENST00000461780 RB1CC1Q8TDY2 1594 aa33.59■■■□□ 2.97
PPARGC1B-206ENST00000461780 NACADO15069 1562 aa33.31■■■□□ 2.92
PPARGC1B-206ENST00000461780 UNC13AQ9UPW8 1703 aa33.05■■■□□ 2.88
PPARGC1B-206ENST00000461780 PABPN1Q86U42 306 aaKnown RBP eCLIP32.85■■■□□ 2.85
PPARGC1B-206ENST00000461780 MYO15BQ96JP2 1530 aa32.83■■■□□ 2.85
PPARGC1B-206ENST00000461780 BICRAQ9NZM4 1560 aa32.8■■■□□ 2.84
PPARGC1B-206ENST00000461780 DCAF8L2P0C7V8 631 aa32.76■■■□□ 2.83
PPARGC1B-206ENST00000461780 ZCCHC6Q5VYS8 1495 aaKnown RBP32.33■■■□□ 2.77
PPARGC1B-206ENST00000461780 DCAF1Q9Y4B6 1507 aa32.31■■■□□ 2.76
PPARGC1B-206ENST00000461780 SHROOM4Q9ULL8 1493 aa32.2■■■□□ 2.75
PPARGC1B-206ENST00000461780 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
PPARGC1B-206ENST00000461780 SCRIBQ14160 1630 aa31.98■■■□□ 2.71
PPARGC1B-206ENST00000461780 CECR2Q9BXF3 1484 aa31.92■■■□□ 2.7
PPARGC1B-206ENST00000461780 EIF4G1Q04637 1599 aaKnown RBP31.9■■■□□ 2.7
PPARGC1B-206ENST00000461780 DNAJC5Q9H3Z4 198 aa31■■■□□ 2.55
PPARGC1B-206ENST00000461780 NCAPD3P42695 1498 aa30.79■■■□□ 2.52
PPARGC1B-206ENST00000461780 CUX2O14529 1486 aa30.66■■■□□ 2.5
PPARGC1B-206ENST00000461780 ATAD2BQ9ULI0 1458 aa30.63■■■□□ 2.49
PPARGC1B-206ENST00000461780 SMARCA4P51532 1647 aa30.55■■■□□ 2.48
PPARGC1B-206ENST00000461780 HMGXB3Q12766 1538 aa30.53■■■□□ 2.48
PPARGC1B-206ENST00000461780 SMARCA2P51531 1590 aa30.48■■■□□ 2.47
PPARGC1B-206ENST00000461780 ERCC6Q03468 1493 aa30.46■■■□□ 2.47
PPARGC1B-206ENST00000461780 NESP48681 1621 aa30.4■■■□□ 2.46
PPARGC1B-206ENST00000461780 PEG3Q9GZU2 1588 aa30.33■■■□□ 2.45
PPARGC1B-206ENST00000461780 BAZ1AQ9NRL2 1556 aaPredicted RBP30.29■■■□□ 2.44
PPARGC1B-206ENST00000461780 BAZ1BQ9UIG0 1483 aaKnown RBP30.23■■■□□ 2.43
PPARGC1B-206ENST00000461780 THOC2Q8NI27 1593 aaKnown RBP30.22■■■□□ 2.43
PPARGC1B-206ENST00000461780 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
PPARGC1B-206ENST00000461780 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
PPARGC1B-206ENST00000461780 KIF21AQ7Z4S6 1674 aa30.05■■■□□ 2.4
PPARGC1B-206ENST00000461780 PDS5BQ9NTI5 1447 aa29.84■■■□□ 2.37
PPARGC1B-206ENST00000461780 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
PPARGC1B-206ENST00000461780 WIZO95785 1651 aa29.75■■■□□ 2.35
PPARGC1B-206ENST00000461780 WDR62O43379 1518 aa29.69■■■□□ 2.34
PPARGC1B-206ENST00000461780 MRC2Q9UBG0 1479 aa29.67■■■□□ 2.34
PPARGC1B-206ENST00000461780 CEP164Q9UPV0 1460 aa29.45■■■□□ 2.31
PPARGC1B-206ENST00000461780 CFTRP13569 1480 aa29.42■■■□□ 2.3
PPARGC1B-206ENST00000461780 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
PPARGC1B-206ENST00000461780 RSF1Q96T23 1441 aaPredicted RBP29.35■■■□□ 2.29
PPARGC1B-206ENST00000461780 TRIM41Q8WV44 630 aa29.31■■■□□ 2.28
PPARGC1B-206ENST00000461780 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
PPARGC1B-206ENST00000461780 URB2Q14146 1524 aaKnown RBP29.29■■■□□ 2.28
PPARGC1B-206ENST00000461780 PRDM2Q13029 1718 aa29.2■■■□□ 2.26
PPARGC1B-206ENST00000461780 OSCARQ8IYS5 282 aa29.09■■■□□ 2.25
PPARGC1B-206ENST00000461780 CCDC88BA6NC98 1476 aa28.97■■■□□ 2.23
PPARGC1B-206ENST00000461780 ZNF608Q9ULD9 1512 aaPredicted RBP28.95■■■□□ 2.23
PPARGC1B-206ENST00000461780 RIMBP3CA6NJZ7 1639 aa28.92■■■□□ 2.22
PPARGC1B-206ENST00000461780 RIMBP3BA6NNM3 1639 aa28.92■■■□□ 2.22
PPARGC1B-206ENST00000461780 RIMBP3Q9UFD9 1639 aa28.92■■■□□ 2.22
PPARGC1B-206ENST00000461780 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
PPARGC1B-206ENST00000461780 TOPBP1Q92547 1522 aa28.88■■■□□ 2.21
PPARGC1B-206ENST00000461780 EIF4G3O43432 1585 aaKnown RBP28.79■■■□□ 2.2
PPARGC1B-206ENST00000461780 ARHGEF11O15085 1522 aa28.77■■■□□ 2.2
PPARGC1B-206ENST00000461780 TARBP1Q13395 1621 aaKnown RBP28.74■■■□□ 2.19
PPARGC1B-206ENST00000461780 DNMBPQ6XZF7 1577 aa28.74■■■□□ 2.19
PPARGC1B-206ENST00000461780 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
PPARGC1B-206ENST00000461780 CHD1O14646 1710 aa28.66■■■□□ 2.18
PPARGC1B-206ENST00000461780 AQRO60306 1485 aaKnown RBP eCLIP28.59■■■□□ 2.172e-8■■■□□ 16.9
PPARGC1B-206ENST00000461780 POLA1P09884 1462 aaPredicted RBP28.56■■■□□ 2.16
PPARGC1B-206ENST00000461780 ARAP1Q96P48 1450 aa28.48■■■□□ 2.15
PPARGC1B-206ENST00000461780 RAD54L2Q9Y4B4 1467 aa28.45■■■□□ 2.14
PPARGC1B-206ENST00000461780 CYB5RLQ6IPT4 315 aa28.42■■■□□ 2.14
PPARGC1B-206ENST00000461780 WDR97A6NE52 1622 aa28.35■■■□□ 2.13
PPARGC1B-206ENST00000461780 SOGA1O94964 1423 aa28.35■■■□□ 2.13
PPARGC1B-206ENST00000461780 CLASP1Q7Z460 1538 aa28.34■■■□□ 2.13
PPARGC1B-206ENST00000461780 TDRD9Q8NDG6 1382 aaKnown RBP28.34■■■□□ 2.13
PPARGC1B-206ENST00000461780 FGD5Q6ZNL6 1462 aa28.31■■■□□ 2.12
PPARGC1B-206ENST00000461780 CUX1P39880 1505 aa28.3■■■□□ 2.12
PPARGC1B-206ENST00000461780 SNAPC4Q5SXM2 1469 aa28.28■■■□□ 2.12
PPARGC1B-206ENST00000461780 FBLN2P98095 1184 aa28.25■■■□□ 2.11
PPARGC1B-206ENST00000461780 MAGI1Q96QZ7 1491 aaPredicted RBP28.21■■■□□ 2.11
PPARGC1B-206ENST00000461780 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
PPARGC1B-206ENST00000461780 GRIN2BQ13224 1484 aa28.15■■■□□ 2.1
PPARGC1B-206ENST00000461780 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
PPARGC1B-206ENST00000461780 SYNJ2O15056 1496 aa28.12■■■□□ 2.09
PPARGC1B-206ENST00000461780 TRHP20396 242 aaPredicted RBP28.08■■■□□ 2.09
PPARGC1B-206ENST00000461780 ABCA5Q8WWZ7 1642 aa28.06■■■□□ 2.08
PPARGC1B-206ENST00000461780 CHMP7Q8WUX9 453 aaPredicted RBP28.05■■■□□ 2.08
PPARGC1B-206ENST00000461780 GAPVD1Q14C86 1478 aa28.02■■■□□ 2.08
PPARGC1B-206ENST00000461780 ABCA10Q8WWZ4 1543 aa28.01■■■□□ 2.07
PPARGC1B-206ENST00000461780 ERCC6L2Q5T890 1561 aa27.89■■■□□ 2.05
PPARGC1B-206ENST00000461780 GRIN2AQ12879 1464 aa27.83■■■□□ 2.05
PPARGC1B-206ENST00000461780 ADAMTS12P58397 1594 aa27.82■■■□□ 2.04
PPARGC1B-206ENST00000461780 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
PPARGC1B-206ENST00000461780 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
PPARGC1B-206ENST00000461780 NUP160Q12769 1436 aa27.8■■■□□ 2.04
PPARGC1B-206ENST00000461780 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
PPARGC1B-206ENST00000461780 TOP2BQ02880 1626 aa27.76■■■□□ 2.03
PPARGC1B-206ENST00000461780 WRNQ14191 1432 aaPredicted RBP eCLIP27.73■■■□□ 2.033e-7■■■■□ 25.1
PPARGC1B-206ENST00000461780 FHAD1B1AJZ9 1412 aa27.64■■■□□ 2.02
PPARGC1B-206ENST00000461780 ERICH3Q5RHP9 1530 aa27.63■■■□□ 2.01
PPARGC1B-206ENST00000461780 KIF13AQ9H1H9 1805 aa27.61■■■□□ 2.01
PPARGC1B-206ENST00000461780 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
PPARGC1B-206ENST00000461780 PRG4Q92954 1404 aaPredicted RBP27.45■■□□□ 1.98
PPARGC1B-206ENST00000461780 RUSC2Q8N2Y8 1516 aa27.45■■□□□ 1.98
PPARGC1B-206ENST00000461780 AEBP2Q6ZN18 517 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms