RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
TGFBR1-209ENST00000552516 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
TGFBR1-209ENST00000552516 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
TGFBR1-209ENST00000552516 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
TGFBR1-209ENST00000552516 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
TGFBR1-209ENST00000552516 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
TGFBR1-209ENST00000552516 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
TGFBR1-209ENST00000552516 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
TGFBR1-209ENST00000552516 PCGF6Q9BYE7 350 aa17.59■□□□□ 0.41
TGFBR1-209ENST00000552516 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
TGFBR1-209ENST00000552516 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
TGFBR1-209ENST00000552516 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
TGFBR1-209ENST00000552516 ABCC9O60706 1549 aa17.19■□□□□ 0.34
TGFBR1-209ENST00000552516 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
TGFBR1-209ENST00000552516 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
TGFBR1-209ENST00000552516 UBTFP17480 764 aaKnown RBP16.99■□□□□ 0.31
TGFBR1-209ENST00000552516 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
TGFBR1-209ENST00000552516 APLP2Q06481 763 aa16.84■□□□□ 0.29
TGFBR1-209ENST00000552516 CCER1Q8TC90 406 aaPredicted RBP16.77■□□□□ 0.27
TGFBR1-209ENST00000552516 ITGAEP38570 1179 aa16.67■□□□□ 0.26
TGFBR1-209ENST00000552516 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
TGFBR1-209ENST00000552516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
TGFBR1-209ENST00000552516 YTHDC1Q96MU7 727 aaKnown RBP16.55■□□□□ 0.24
TGFBR1-209ENST00000552516 SCRIBQ14160 1630 aa16.52■□□□□ 0.24
TGFBR1-209ENST00000552516 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
TGFBR1-209ENST00000552516 HRCP23327 699 aa16.5■□□□□ 0.23
TGFBR1-209ENST00000552516 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.22
TGFBR1-209ENST00000552516 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
TGFBR1-209ENST00000552516 CNGB1Q14028 1251 aaPredicted RBP16.33■□□□□ 0.2
TGFBR1-209ENST00000552516 ARID3CA6NKF2 412 aa16.27■□□□□ 0.2
TGFBR1-209ENST00000552516 P3H3Q8IVL6 736 aa16.26■□□□□ 0.19
TGFBR1-209ENST00000552516 ZEB1P37275 1124 aaPredicted RBP16.12■□□□□ 0.17
TGFBR1-209ENST00000552516 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
TGFBR1-209ENST00000552516 FAM50AQ14320 339 aaKnown RBP16.06■□□□□ 0.16
TGFBR1-209ENST00000552516 FBLN2P98095 1184 aa16.04■□□□□ 0.16
TGFBR1-209ENST00000552516 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
TGFBR1-209ENST00000552516 CSRNP3Q8WYN3 585 aa16.02■□□□□ 0.15
TGFBR1-209ENST00000552516 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
TGFBR1-209ENST00000552516 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
TGFBR1-209ENST00000552516 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
TGFBR1-209ENST00000552516 CENPBP07199 599 aaPredicted RBP15.89■□□□□ 0.13
TGFBR1-209ENST00000552516 MYT1LQ9UL68 1186 aa15.89■□□□□ 0.13
TGFBR1-209ENST00000552516 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
TGFBR1-209ENST00000552516 TRIM52Q96A61 297 aa15.76■□□□□ 0.11
TGFBR1-209ENST00000552516 ZNF326Q5BKZ1 582 aaKnown RBP15.74■□□□□ 0.11
TGFBR1-209ENST00000552516 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
TGFBR1-209ENST00000552516 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
TGFBR1-209ENST00000552516 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
TGFBR1-209ENST00000552516 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
TGFBR1-209ENST00000552516 DCAF1Q9Y4B6 1507 aa15.67■□□□□ 0.1
TGFBR1-209ENST00000552516 BCANQ96GW7 911 aa15.66■□□□□ 0.1
TGFBR1-209ENST00000552516 CHIC2Q9UKJ5 165 aa15.64■□□□□ 0.09
TGFBR1-209ENST00000552516 SOGA1O94964 1423 aa15.64■□□□□ 0.09
TGFBR1-209ENST00000552516 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
TGFBR1-209ENST00000552516 GTF3C3Q9Y5Q9 886 aa15.59■□□□□ 0.09
TGFBR1-209ENST00000552516 SENP3-EIF4A1A0A087X0R7 540 aa15.58■□□□□ 0.08
TGFBR1-209ENST00000552516 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.08
TGFBR1-209ENST00000552516 WIZO95785 1651 aa15.51■□□□□ 0.07
TGFBR1-209ENST00000552516 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
TGFBR1-209ENST00000552516 CEP162Q5TB80 1403 aa15.5■□□□□ 0.07
TGFBR1-209ENST00000552516 PELP1Q8IZL8 1130 aaKnown RBP15.5■□□□□ 0.07
TGFBR1-209ENST00000552516 CCDC88BA6NC98 1476 aa15.5■□□□□ 0.07
TGFBR1-209ENST00000552516 SLC4A1APQ9BWU0 796 aaKnown RBP15.49■□□□□ 0.07
TGFBR1-209ENST00000552516 NACADO15069 1562 aa15.48■□□□□ 0.07
TGFBR1-209ENST00000552516 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
TGFBR1-209ENST00000552516 CLIP1P30622 1438 aa15.46■□□□□ 0.06
TGFBR1-209ENST00000552516 NEFLP07196 543 aa15.45■□□□□ 0.06
TGFBR1-209ENST00000552516 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
TGFBR1-209ENST00000552516 DDX10Q13206 875 aaKnown RBP15.42■□□□□ 0.06
TGFBR1-209ENST00000552516 RUSC2Q8N2Y8 1516 aa15.41■□□□□ 0.06
TGFBR1-209ENST00000552516 RRP7BPQ9NSQ0 103 aa15.4■□□□□ 0.06
TGFBR1-209ENST00000552516 MIER1Q8N108 512 aa15.39■□□□□ 0.05
TGFBR1-209ENST00000552516 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
TGFBR1-209ENST00000552516 KANK4Q5T7N3 995 aaPredicted RBP15.36■□□□□ 0.05
TGFBR1-209ENST00000552516 BAZ1AQ9NRL2 1556 aaPredicted RBP15.33■□□□□ 0.04
TGFBR1-209ENST00000552516 SIN3AQ96ST3 1273 aa15.33■□□□□ 0.04
TGFBR1-209ENST00000552516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.04
TGFBR1-209ENST00000552516 SALL2Q9Y467 1007 aaPredicted RBP15.3■□□□□ 0.04
TGFBR1-209ENST00000552516 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
TGFBR1-209ENST00000552516 ACIN1Q9UKV3 1341 aaKnown RBP15.28■□□□□ 0.04
TGFBR1-209ENST00000552516 KCNH8Q96L42 1107 aa15.27■□□□□ 0.04
TGFBR1-209ENST00000552516 CHMP7Q8WUX9 453 aaPredicted RBP15.27■□□□□ 0.03
TGFBR1-209ENST00000552516 KDM2AQ9Y2K7 1162 aa15.26■□□□□ 0.03
TGFBR1-209ENST00000552516 ERICH6Q7L0X2 663 aa15.25■□□□□ 0.03
TGFBR1-209ENST00000552516 GOLGA3Q08378 1498 aa15.24■□□□□ 0.03
TGFBR1-209ENST00000552516 BCL11AQ9H165 835 aa15.23■□□□□ 0.03
TGFBR1-209ENST00000552516 MTUS2Q5JR59 1369 aa15.21■□□□□ 0.03
TGFBR1-209ENST00000552516 IRX6P78412 446 aaPredicted RBP15.21■□□□□ 0.03
TGFBR1-209ENST00000552516 ANP32CO43423 234 aa15.21■□□□□ 0.02
TGFBR1-209ENST00000552516 TDRD9Q8NDG6 1382 aaKnown RBP15.2■□□□□ 0.02
TGFBR1-209ENST00000552516 TNIKQ9UKE5 1360 aa15.19■□□□□ 0.02
TGFBR1-209ENST00000552516 FOXD1Q16676 465 aa15.18■□□□□ 0.02
TGFBR1-209ENST00000552516 CHGAP10645 457 aaKnown RBP15.17■□□□□ 0.02
TGFBR1-209ENST00000552516 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
TGFBR1-209ENST00000552516 CUX2O14529 1486 aa15.17■□□□□ 0.02
TGFBR1-209ENST00000552516 FAM9BQ8IZU0 186 aa15.17■□□□□ 0.02
TGFBR1-209ENST00000552516 TONSLQ96HA7 1378 aa15.13■□□□□ 0.01
TGFBR1-209ENST00000552516 RGL3Q3MIN7 710 aa15.13■□□□□ 0.01
TGFBR1-209ENST00000552516 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
TGFBR1-209ENST00000552516 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms