Protein–RNA interactions for Protein: P59998

ARPC4, Actin-related protein 2/3 complex subunit 4, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4P59998 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.58■□□□□ 0.89
ARPC4P59998 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARPC4P59998 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARPC4P59998 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.58■□□□□ 0.89
ARPC4P59998 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
ARPC4P59998 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARPC4P59998 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARPC4P59998 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARPC4P59998 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARPC4P59998 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARPC4P59998 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARPC4P59998 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARPC4P59998 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARPC4P59998 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARPC4P59998 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARPC4P59998 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARPC4P59998 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARPC4P59998 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARPC4P59998 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARPC4P59998 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARPC4P59998 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARPC4P59998 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARPC4P59998 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.56■□□□□ 0.88
ARPC4P59998 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARPC4P59998 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
ARPC4P59998 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARPC4P59998 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARPC4P59998 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARPC4P59998 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARPC4P59998 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARPC4P59998 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARPC4P59998 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.55■□□□□ 0.88
ARPC4P59998 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARPC4P59998 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.55■□□□□ 0.88
ARPC4P59998 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.55■□□□□ 0.88
ARPC4P59998 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARPC4P59998 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARPC4P59998 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
ARPC4P59998 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARPC4P59998 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARPC4P59998 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARPC4P59998 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.54■□□□□ 0.88
ARPC4P59998 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ARPC4P59998 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARPC4P59998 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARPC4P59998 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARPC4P59998 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.54■□□□□ 0.88
ARPC4P59998 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARPC4P59998 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.54■□□□□ 0.88
ARPC4P59998 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.54■□□□□ 0.88
ARPC4P59998 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARPC4P59998 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARPC4P59998 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARPC4P59998 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.53■□□□□ 0.88
ARPC4P59998 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARPC4P59998 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.53■□□□□ 0.88
ARPC4P59998 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARPC4P59998 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.53■□□□□ 0.88
ARPC4P59998 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARPC4P59998 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARPC4P59998 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARPC4P59998 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARPC4P59998 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ARPC4P59998 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
ARPC4P59998 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ARPC4P59998 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.52■□□□□ 0.88
ARPC4P59998 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ARPC4P59998 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARPC4P59998 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARPC4P59998 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ARPC4P59998 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
ARPC4P59998 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
ARPC4P59998 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARPC4P59998 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARPC4P59998 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ARPC4P59998 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ARPC4P59998 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ARPC4P59998 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARPC4P59998 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ARPC4P59998 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ARPC4P59998 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARPC4P59998 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARPC4P59998 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ARPC4P59998 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.49■□□□□ 0.87
ARPC4P59998 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARPC4P59998 AC010501.1-201ENST00000606270 1962 ntBASIC20.49■□□□□ 0.87
ARPC4P59998 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.49■□□□□ 0.87
ARPC4P59998 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARPC4P59998 AP006261.1-201ENST00000584783 668 ntBASIC20.49■□□□□ 0.87
ARPC4P59998 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARPC4P59998 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARPC4P59998 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARPC4P59998 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARPC4P59998 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARPC4P59998 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.49■□□□□ 0.87
ARPC4P59998 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ARPC4P59998 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARPC4P59998 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARPC4P59998 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
ARPC4P59998 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms