Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC1P51610 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC1P51610 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HCFC1P51610 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
HCFC1P51610 MIR638-201ENST00000385237 100 ntBASIC21.05■□□□□ 0.96
HCFC1P51610 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC1P51610 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC1P51610 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.05■□□□□ 0.96
HCFC1P51610 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HCFC1P51610 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.05■□□□□ 0.96
HCFC1P51610 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HCFC1P51610 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HCFC1P51610 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.04■□□□□ 0.96
HCFC1P51610 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HCFC1P51610 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HCFC1P51610 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
HCFC1P51610 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HCFC1P51610 AC021242.3-201ENST00000607598 1377 ntBASIC21.03■□□□□ 0.96
HCFC1P51610 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.03■□□□□ 0.96
HCFC1P51610 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.03■□□□□ 0.96
HCFC1P51610 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HCFC1P51610 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.02■□□□□ 0.96
HCFC1P51610 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.02■□□□□ 0.96
HCFC1P51610 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
HCFC1P51610 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HCFC1P51610 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.02■□□□□ 0.96
HCFC1P51610 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.02■□□□□ 0.96
HCFC1P51610 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.01■□□□□ 0.95
HCFC1P51610 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
HCFC1P51610 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HCFC1P51610 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21■□□□□ 0.95
HCFC1P51610 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HCFC1P51610 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HCFC1P51610 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HCFC1P51610 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HCFC1P51610 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HCFC1P51610 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HCFC1P51610 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.99■□□□□ 0.95
HCFC1P51610 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.99■□□□□ 0.95
HCFC1P51610 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.99■□□□□ 0.95
HCFC1P51610 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.99■□□□□ 0.95
HCFC1P51610 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.99■□□□□ 0.95
HCFC1P51610 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HCFC1P51610 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HCFC1P51610 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HCFC1P51610 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HCFC1P51610 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HCFC1P51610 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HCFC1P51610 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.99■□□□□ 0.95
HCFC1P51610 AC092028.1-203ENST00000608262 953 ntBASIC20.99■□□□□ 0.95
HCFC1P51610 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HCFC1P51610 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HCFC1P51610 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HCFC1P51610 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.98■□□□□ 0.95
HCFC1P51610 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HCFC1P51610 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HCFC1P51610 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HCFC1P51610 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HCFC1P51610 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HCFC1P51610 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.97■□□□□ 0.95
HCFC1P51610 AC120024.1-201ENST00000562672 995 ntBASIC20.97■□□□□ 0.95
HCFC1P51610 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.97■□□□□ 0.95
HCFC1P51610 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HCFC1P51610 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HCFC1P51610 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HCFC1P51610 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.97■□□□□ 0.95
HCFC1P51610 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.97■□□□□ 0.95
HCFC1P51610 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HCFC1P51610 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HCFC1P51610 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HCFC1P51610 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HCFC1P51610 AC142086.6-201ENST00000621154 1765 ntBASIC20.96■□□□□ 0.95
HCFC1P51610 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HCFC1P51610 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HCFC1P51610 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
HCFC1P51610 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.95■□□□□ 0.94
HCFC1P51610 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HCFC1P51610 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HCFC1P51610 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.95■□□□□ 0.94
HCFC1P51610 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.95■□□□□ 0.94
HCFC1P51610 BX255925.1-201ENST00000566954 1854 ntBASIC20.95■□□□□ 0.94
HCFC1P51610 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HCFC1P51610 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.95■□□□□ 0.94
HCFC1P51610 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.95■□□□□ 0.94
HCFC1P51610 AC110285.6-201ENST00000617652 491 ntBASIC20.95■□□□□ 0.94
HCFC1P51610 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HCFC1P51610 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC1P51610 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.94■□□□□ 0.94
HCFC1P51610 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.94■□□□□ 0.94
HCFC1P51610 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC1P51610 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC1P51610 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCFC1P51610 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
HCFC1P51610 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.94■□□□□ 0.94
HCFC1P51610 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.94■□□□□ 0.94
HCFC1P51610 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.93■□□□□ 0.94
HCFC1P51610 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC1P51610 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC1P51610 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCFC1P51610 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms