Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THBS3P49746 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.58■□□□□ 0.73
THBS3P49746 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
THBS3P49746 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THBS3P49746 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THBS3P49746 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THBS3P49746 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
THBS3P49746 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.58■□□□□ 0.72
THBS3P49746 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.58■□□□□ 0.72
THBS3P49746 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.58■□□□□ 0.72
THBS3P49746 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THBS3P49746 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.57■□□□□ 0.72
THBS3P49746 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
THBS3P49746 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
THBS3P49746 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.57■□□□□ 0.72
THBS3P49746 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.57■□□□□ 0.72
THBS3P49746 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
THBS3P49746 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THBS3P49746 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.57■□□□□ 0.72
THBS3P49746 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
THBS3P49746 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.57■□□□□ 0.72
THBS3P49746 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
THBS3P49746 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
THBS3P49746 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
THBS3P49746 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THBS3P49746 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THBS3P49746 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THBS3P49746 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THBS3P49746 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.55■□□□□ 0.72
THBS3P49746 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
THBS3P49746 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
THBS3P49746 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
THBS3P49746 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THBS3P49746 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.55■□□□□ 0.72
THBS3P49746 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THBS3P49746 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.55■□□□□ 0.72
THBS3P49746 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THBS3P49746 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.55■□□□□ 0.72
THBS3P49746 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
THBS3P49746 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.54■□□□□ 0.72
THBS3P49746 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS3P49746 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
THBS3P49746 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THBS3P49746 ABHD17AP5-201ENST00000580133 923 ntBASIC19.54■□□□□ 0.72
THBS3P49746 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.54■□□□□ 0.72
THBS3P49746 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
THBS3P49746 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS3P49746 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THBS3P49746 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.53■□□□□ 0.72
THBS3P49746 AL157400.5-201ENST00000507624 621 ntBASIC19.53■□□□□ 0.72
THBS3P49746 AC060814.1-201ENST00000554326 538 ntBASIC19.53■□□□□ 0.72
THBS3P49746 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THBS3P49746 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THBS3P49746 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
THBS3P49746 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
THBS3P49746 AC142381.3-201ENST00000568208 1670 ntBASIC19.52■□□□□ 0.72
THBS3P49746 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THBS3P49746 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.52■□□□□ 0.72
THBS3P49746 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.52■□□□□ 0.72
THBS3P49746 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
THBS3P49746 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THBS3P49746 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
THBS3P49746 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.52■□□□□ 0.72
THBS3P49746 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.52■□□□□ 0.72
THBS3P49746 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.52■□□□□ 0.71
THBS3P49746 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THBS3P49746 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS3P49746 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THBS3P49746 MIR3960-201ENST00000583311 91 ntBASIC19.51■□□□□ 0.71
THBS3P49746 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
THBS3P49746 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THBS3P49746 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS3P49746 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THBS3P49746 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS3P49746 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS3P49746 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
THBS3P49746 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS3P49746 AC025884.2-201ENST00000553429 711 ntBASIC19.5■□□□□ 0.71
THBS3P49746 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.5■□□□□ 0.71
THBS3P49746 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.5■□□□□ 0.71
THBS3P49746 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS3P49746 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS3P49746 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
THBS3P49746 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THBS3P49746 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.49■□□□□ 0.71
THBS3P49746 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS3P49746 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS3P49746 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS3P49746 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THBS3P49746 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
THBS3P49746 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
THBS3P49746 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS3P49746 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THBS3P49746 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
THBS3P49746 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS3P49746 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS3P49746 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS3P49746 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS3P49746 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
THBS3P49746 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms