Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL1P22362 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCL1P22362 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL1P22362 AP003733.4-201ENST00000623785 1697 ntBASIC20.64■□□□□ 0.89
CCL1P22362 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCL1P22362 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCL1P22362 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL1P22362 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCL1P22362 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL1P22362 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL1P22362 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.63■□□□□ 0.89
CCL1P22362 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.63■□□□□ 0.89
CCL1P22362 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL1P22362 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCL1P22362 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL1P22362 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCL1P22362 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.62■□□□□ 0.89
CCL1P22362 ECEL1P2-201ENST00000461596 1295 ntBASIC20.62■□□□□ 0.89
CCL1P22362 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL1P22362 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCL1P22362 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL1P22362 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL1P22362 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL1P22362 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL1P22362 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.61■□□□□ 0.89
CCL1P22362 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL1P22362 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL1P22362 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL1P22362 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL1P22362 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL1P22362 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL1P22362 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.6■□□□□ 0.89
CCL1P22362 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL1P22362 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCL1P22362 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL1P22362 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL1P22362 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL1P22362 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL1P22362 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.59■□□□□ 0.89
CCL1P22362 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL1P22362 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL1P22362 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL1P22362 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL1P22362 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCL1P22362 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL1P22362 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.58■□□□□ 0.89
CCL1P22362 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.58■□□□□ 0.89
CCL1P22362 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL1P22362 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCL1P22362 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCL1P22362 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCL1P22362 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.57■□□□□ 0.88
CCL1P22362 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCL1P22362 RP9P-202ENST00000450133 1212 ntBASIC20.57■□□□□ 0.88
CCL1P22362 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL1P22362 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCL1P22362 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL1P22362 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL1P22362 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CCL1P22362 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL1P22362 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL1P22362 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL1P22362 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.56■□□□□ 0.88
CCL1P22362 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCL1P22362 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL1P22362 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL1P22362 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL1P22362 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCL1P22362 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCL1P22362 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.56■□□□□ 0.88
CCL1P22362 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL1P22362 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL1P22362 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL1P22362 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL1P22362 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.55■□□□□ 0.88
CCL1P22362 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL1P22362 AC022413.1-201ENST00000624602 984 ntBASIC20.55■□□□□ 0.88
CCL1P22362 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL1P22362 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCL1P22362 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.54■□□□□ 0.88
CCL1P22362 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCL1P22362 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCL1P22362 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.54■□□□□ 0.88
CCL1P22362 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.53■□□□□ 0.88
CCL1P22362 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCL1P22362 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCL1P22362 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.53■□□□□ 0.88
CCL1P22362 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCL1P22362 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCL1P22362 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL1P22362 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL1P22362 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CCL1P22362 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCL1P22362 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCL1P22362 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCL1P22362 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL1P22362 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.52■□□□□ 0.88
CCL1P22362 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCL1P22362 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCL1P22362 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms