Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATF1P18846 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATF1P18846 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATF1P18846 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATF1P18846 LINC01124-201ENST00000409786 2117 ntBASIC20.91■□□□□ 0.94
ATF1P18846 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.91■□□□□ 0.94
ATF1P18846 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATF1P18846 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.91■□□□□ 0.94
ATF1P18846 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ATF1P18846 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.91■□□□□ 0.94
ATF1P18846 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF1P18846 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF1P18846 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
ATF1P18846 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF1P18846 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATF1P18846 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATF1P18846 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.89■□□□□ 0.94
ATF1P18846 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF1P18846 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATF1P18846 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF1P18846 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF1P18846 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF1P18846 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATF1P18846 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ATF1P18846 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF1P18846 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATF1P18846 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF1P18846 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF1P18846 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATF1P18846 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.88■□□□□ 0.93
ATF1P18846 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATF1P18846 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF1P18846 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATF1P18846 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATF1P18846 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATF1P18846 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATF1P18846 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.87■□□□□ 0.93
ATF1P18846 CR559946.2-201ENST00000623684 991 ntBASIC20.87■□□□□ 0.93
ATF1P18846 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATF1P18846 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.87■□□□□ 0.93
ATF1P18846 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATF1P18846 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATF1P18846 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.87■□□□□ 0.93
ATF1P18846 AC012676.1-201ENST00000574705 1949 ntBASIC20.86■□□□□ 0.93
ATF1P18846 AL359504.2-201ENST00000605506 1601 ntBASIC20.86■□□□□ 0.93
ATF1P18846 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATF1P18846 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATF1P18846 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATF1P18846 ABHD17AP4-201ENST00000411545 909 ntBASIC20.86■□□□□ 0.93
ATF1P18846 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.86■□□□□ 0.93
ATF1P18846 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
ATF1P18846 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
ATF1P18846 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATF1P18846 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATF1P18846 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ATF1P18846 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATF1P18846 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.85■□□□□ 0.93
ATF1P18846 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATF1P18846 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.85■□□□□ 0.93
ATF1P18846 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATF1P18846 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATF1P18846 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATF1P18846 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.84■□□□□ 0.93
ATF1P18846 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ATF1P18846 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATF1P18846 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATF1P18846 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.84■□□□□ 0.93
ATF1P18846 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATF1P18846 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATF1P18846 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
ATF1P18846 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF1P18846 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF1P18846 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.83■□□□□ 0.93
ATF1P18846 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATF1P18846 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.83■□□□□ 0.92
ATF1P18846 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ATF1P18846 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF1P18846 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF1P18846 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATF1P18846 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.82■□□□□ 0.92
ATF1P18846 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ATF1P18846 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATF1P18846 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF1P18846 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF1P18846 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF1P18846 AP003733.4-201ENST00000623785 1697 ntBASIC20.81■□□□□ 0.92
ATF1P18846 AC126177.7-201ENST00000547904 679 ntBASIC20.81■□□□□ 0.92
ATF1P18846 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATF1P18846 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.81■□□□□ 0.92
ATF1P18846 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ATF1P18846 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.81■□□□□ 0.92
ATF1P18846 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATF1P18846 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATF1P18846 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF1P18846 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATF1P18846 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF1P18846 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATF1P18846 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATF1P18846 MIR3648-2-201ENST00000581792 180 ntBASIC20.8■□□□□ 0.92
ATF1P18846 MIR3648-1-201ENST00000615959 180 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms