Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SFTPBP07988 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SFTPBP07988 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SFTPBP07988 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SFTPBP07988 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.54■□□□□ 0.88
SFTPBP07988 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.54■□□□□ 0.88
SFTPBP07988 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SFTPBP07988 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SFTPBP07988 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SFTPBP07988 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SFTPBP07988 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SFTPBP07988 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SFTPBP07988 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SFTPBP07988 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.53■□□□□ 0.88
SFTPBP07988 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SFTPBP07988 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
SFTPBP07988 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SFTPBP07988 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SFTPBP07988 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SFTPBP07988 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SFTPBP07988 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SFTPBP07988 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
SFTPBP07988 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SFTPBP07988 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SFTPBP07988 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SFTPBP07988 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SFTPBP07988 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SFTPBP07988 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SFTPBP07988 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SFTPBP07988 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.5■□□□□ 0.87
SFTPBP07988 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SFTPBP07988 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SFTPBP07988 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SFTPBP07988 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.49■□□□□ 0.87
SFTPBP07988 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SFTPBP07988 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SFTPBP07988 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SFTPBP07988 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SFTPBP07988 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SFTPBP07988 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SFTPBP07988 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SFTPBP07988 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
SFTPBP07988 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.47■□□□□ 0.87
SFTPBP07988 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.47■□□□□ 0.87
SFTPBP07988 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SFTPBP07988 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SFTPBP07988 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SFTPBP07988 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SFTPBP07988 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.46■□□□□ 0.87
SFTPBP07988 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.46■□□□□ 0.87
SFTPBP07988 ABHD17AP5-201ENST00000580133 923 ntBASIC20.46■□□□□ 0.87
SFTPBP07988 AC092296.2-201ENST00000589470 999 ntBASIC20.46■□□□□ 0.87
SFTPBP07988 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.46■□□□□ 0.87
SFTPBP07988 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SFTPBP07988 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SFTPBP07988 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SFTPBP07988 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SFTPBP07988 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SFTPBP07988 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.45■□□□□ 0.86
SFTPBP07988 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SFTPBP07988 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SFTPBP07988 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SFTPBP07988 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.45■□□□□ 0.86
SFTPBP07988 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SFTPBP07988 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.44■□□□□ 0.86
SFTPBP07988 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SFTPBP07988 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SFTPBP07988 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SFTPBP07988 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.44■□□□□ 0.86
SFTPBP07988 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SFTPBP07988 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SFTPBP07988 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.43■□□□□ 0.86
SFTPBP07988 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.43■□□□□ 0.86
SFTPBP07988 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SFTPBP07988 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SFTPBP07988 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
SFTPBP07988 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SFTPBP07988 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.43■□□□□ 0.86
SFTPBP07988 AL157400.5-201ENST00000507624 621 ntBASIC20.43■□□□□ 0.86
SFTPBP07988 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SFTPBP07988 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SFTPBP07988 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SFTPBP07988 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.43■□□□□ 0.86
SFTPBP07988 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.42■□□□□ 0.86
SFTPBP07988 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SFTPBP07988 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SFTPBP07988 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.42■□□□□ 0.86
SFTPBP07988 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.42■□□□□ 0.86
SFTPBP07988 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SFTPBP07988 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SFTPBP07988 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SFTPBP07988 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SFTPBP07988 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SFTPBP07988 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SFTPBP07988 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SFTPBP07988 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SFTPBP07988 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.41■□□□□ 0.86
SFTPBP07988 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SFTPBP07988 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SFTPBP07988 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms