Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.21■□□□□ 0.83
CD3DP04234 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD3DP04234 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD3DP04234 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD3DP04234 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD3DP04234 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CD3DP04234 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD3DP04234 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD3DP04234 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD3DP04234 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD3DP04234 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD3DP04234 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD3DP04234 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD3DP04234 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.19■□□□□ 0.82
CD3DP04234 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.19■□□□□ 0.82
CD3DP04234 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.19■□□□□ 0.82
CD3DP04234 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD3DP04234 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.19■□□□□ 0.82
CD3DP04234 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD3DP04234 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CD3DP04234 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CD3DP04234 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD3DP04234 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD3DP04234 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD3DP04234 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD3DP04234 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD3DP04234 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD3DP04234 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD3DP04234 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD3DP04234 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.18■□□□□ 0.82
CD3DP04234 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD3DP04234 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CD3DP04234 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD3DP04234 SLC6A10P-202ENST00000431994 2058 ntBASIC20.17■□□□□ 0.82
CD3DP04234 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.17■□□□□ 0.82
CD3DP04234 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD3DP04234 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD3DP04234 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD3DP04234 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD3DP04234 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD3DP04234 AC079834.2-201ENST00000609776 1949 ntBASIC20.16■□□□□ 0.82
CD3DP04234 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD3DP04234 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD3DP04234 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CD3DP04234 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
CD3DP04234 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD3DP04234 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CD3DP04234 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD3DP04234 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD3DP04234 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CD3DP04234 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD3DP04234 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.14■□□□□ 0.81
CD3DP04234 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CD3DP04234 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CD3DP04234 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.14■□□□□ 0.81
CD3DP04234 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD3DP04234 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD3DP04234 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD3DP04234 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD3DP04234 DUSP8P5-201ENST00000422884 1815 ntBASIC20.13■□□□□ 0.81
CD3DP04234 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD3DP04234 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.13■□□□□ 0.81
CD3DP04234 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD3DP04234 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD3DP04234 MIR3665-201ENST00000578708 105 ntBASIC20.13■□□□□ 0.81
CD3DP04234 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD3DP04234 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD3DP04234 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.13■□□□□ 0.81
CD3DP04234 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CD3DP04234 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
CD3DP04234 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CD3DP04234 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CD3DP04234 AC141586.4-201ENST00000624558 1573 ntBASIC20.12■□□□□ 0.81
CD3DP04234 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CD3DP04234 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.11■□□□□ 0.81
CD3DP04234 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CD3DP04234 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CD3DP04234 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD3DP04234 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CD3DP04234 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD3DP04234 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.1■□□□□ 0.81
CD3DP04234 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.1■□□□□ 0.81
CD3DP04234 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CD3DP04234 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.1■□□□□ 0.81
CD3DP04234 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3DP04234 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3DP04234 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3DP04234 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.09■□□□□ 0.81
CD3DP04234 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD3DP04234 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CD3DP04234 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD3DP04234 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.09■□□□□ 0.81
CD3DP04234 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD3DP04234 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD3DP04234 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD3DP04234 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD3DP04234 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD3DP04234 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.07■□□□□ 0.8
CD3DP04234 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD3DP04234 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms