Protein–RNA interactions for Protein: O60831

PRAF2, PRA1 family protein 2, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2O60831 AL117328.2-201ENST00000624617 1940 ntBASIC20.14■□□□□ 0.81
PRAF2O60831 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAF2O60831 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAF2O60831 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAF2O60831 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAF2O60831 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRAF2O60831 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PRAF2O60831 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAF2O60831 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRAF2O60831 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PRAF2O60831 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAF2O60831 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAF2O60831 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAF2O60831 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAF2O60831 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PRAF2O60831 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAF2O60831 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PRAF2O60831 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.12■□□□□ 0.81
PRAF2O60831 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAF2O60831 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAF2O60831 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAF2O60831 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAF2O60831 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAF2O60831 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRAF2O60831 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PRAF2O60831 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.12■□□□□ 0.81
PRAF2O60831 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PRAF2O60831 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PRAF2O60831 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PRAF2O60831 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PRAF2O60831 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAF2O60831 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAF2O60831 AP002365.1-201ENST00000603448 772 ntBASIC20.11■□□□□ 0.81
PRAF2O60831 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PRAF2O60831 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAF2O60831 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.11■□□□□ 0.81
PRAF2O60831 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAF2O60831 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.11■□□□□ 0.81
PRAF2O60831 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.11■□□□□ 0.81
PRAF2O60831 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAF2O60831 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAF2O60831 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAF2O60831 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PRAF2O60831 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRAF2O60831 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAF2O60831 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PRAF2O60831 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAF2O60831 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAF2O60831 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRAF2O60831 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAF2O60831 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRAF2O60831 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAF2O60831 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAF2O60831 LINC00273-201ENST00000539813 1452 ntBASIC20.09■□□□□ 0.81
PRAF2O60831 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAF2O60831 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAF2O60831 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAF2O60831 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.08■□□□□ 0.81
PRAF2O60831 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAF2O60831 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRAF2O60831 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.08■□□□□ 0.8
PRAF2O60831 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRAF2O60831 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRAF2O60831 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRAF2O60831 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAF2O60831 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAF2O60831 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAF2O60831 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAF2O60831 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRAF2O60831 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PRAF2O60831 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.06■□□□□ 0.8
PRAF2O60831 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRAF2O60831 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAF2O60831 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.06■□□□□ 0.8
PRAF2O60831 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRAF2O60831 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
PRAF2O60831 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAF2O60831 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAF2O60831 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PRAF2O60831 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PRAF2O60831 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAF2O60831 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAF2O60831 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAF2O60831 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAF2O60831 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAF2O60831 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRAF2O60831 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAF2O60831 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAF2O60831 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PRAF2O60831 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PRAF2O60831 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PRAF2O60831 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAF2O60831 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.03■□□□□ 0.8
PRAF2O60831 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAF2O60831 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
PRAF2O60831 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.02■□□□□ 0.8
PRAF2O60831 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
PRAF2O60831 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAF2O60831 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAF2O60831 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms